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Job DescriptionQ46911
Confidence100.00%DateThu Jan 5 12:35:48 GMT 2012
Rank6Aligned Residues448
% Identity13%Templatec2exrA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:cytokinin dehydrogenase 7; PDBTitle: x-ray structure of cytokinin oxidase/dehydrogenase (ckx)2 from arabidopsis thaliana at5g21482
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40.........50.........60.........70.. .......80.........90......
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Query Sequence  ADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNA. HKINGVPRTGASATEGGLETVVEN
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Template Sequence  QGEILCGGAAADIAGRD. . . . . . . . FGGXNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAXA. . EG
Template Known Secondary structure  SS
ST

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S
SSSSS

SSS

SSSTT

..TT
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   37..40.........50... ......60.........70.........80.........90.........100.... ..
 
   97..100........ .110.........120.........130.........140.........150.........160.........170
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Query Sequence  SVVLDGSAMNQI. . . . . . INIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGA
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Template Sequence  GLVVDXSTTAENHFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGP
Template Known Secondary structure  SGGGGTTS


SSSSSTT
BS
S


S

SSBTT



TT

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   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  IEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILRE
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Template Sequence  QTSNVTELDVVTGNGDVVTCSE. . . . IENSELFFSVLGGLGQFGIITRARVLLQPA. PDXVRWIRVVYTEFDEFTQDAEW
Template Known Secondary structure  GGGSTTS
S....SSSTT
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   187..190.........200........ .210.........220.........230........ .240.........250.........260.
 
   251........260.... .....270.........280.........290.........300........
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Query Sequence  IMVEGYRPSIARLY. . . . . . . . . . . . . . . . . . . . . . DAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARY
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Template Conservation                                                                                  
Template Sequence  LVSQKNESSFDYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSVLYCLELGLHYRDSDSNSTIDKRVERLIGR
Template Known Secondary structure  TS
TTSS
SSS

TTTSGGGS
SSTTS


GGGS
TT

S
TTS
TT
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   262.......270.........280.........290.........300.........310.........320.........330.........340.
 
   309310.........320.........330.........340.........350.........360.........370...... ...380.
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Query Sequence  PQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPH. . . . . . . ADDIT
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Template Conservation                                               
                                  
Template Sequence  LRFNEGLRFEVDLPYVDFLLRVKRSEEIAKENGTWETPHPWLNLFVSKRDIGDFNRTVFKELVKNGVNGPXLVYPLLRSR
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TT
TTTTT
SSS








TTT

SS
GGG
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   342.......350.........360.........370.........380.........390.........400.........410.........420.
 
   382.......390.........400.........410.........420.........430.........440.........450.........460.
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Query Sequence  MLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALL
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Template Sequence  WDDRTSVVIPEEGEIFYIVALLRFVPPCAKVSSVEKXVAQNQEIVHWCVKNGIDYKLYLPHYKSQEEWIR. HFGNRWSRF
Template Known Secondary structure  S
TTSS



SS
S




TTS
TT

SS



S.GGG
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   422.......430.........440.........450.........460.........470.........480.........490. ........500
 
   462.......470....... ..480.
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Query Sequence  EGLKKQFDPNGIMNTG. TIYP
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Template Sequence  VDRKAXFDPXAILSPGQKIFN
Template Known Secondary structure 
TT

B
GGG
SS
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   501........510.........520.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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