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Job DescriptionQ46911
Confidence99.93%DateThu Jan 5 12:35:48 GMT 2012
Rank27Aligned Residues177
% Identity12%Templatec1mbbA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:uridine diphospho-n-acetylenolpyruvylglucosamine PDBTitle: oxidoreductase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
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Query Sequence  RKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENM
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Template Sequence  HSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLEDY. . RGTVIINRIKGIEI. HDEPDAW
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   3......10.........20.........30.........40.........50........ .60.........70.. .......
 
   117..120.........130.........140.........150.........160.........170.........180. ........190.....
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Query Sequence  QATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAV. LADGTVTRIKNVPR
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Template Sequence  YLHVGAGENWHRLVKYTLQEGMPGLENLALIPG. CVGSSPIQNIGAYG. . . . VELQRVCAYVDSVELATGKQVRLTAK. .
Template Known Secondary structure  TTSBTT

S
GGGTT

S.BGGGTTTTT
TT....GGGTGGG

TT..
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   80.........90.........100.........110.. .......120...... ...130.........140.........150..
 
   196...200....... ..210.........220........
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Query Sequence  RAAGPDIRHIII. . . . . GNEGALCYITEVTVKIFKFTP
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Template Sequence  . . . . . ECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQ
Template Known Secondary structure  .....TTT
BTTB
GGGTTTTTTSS

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   153......160.........170.........180.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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