Job Description Q46911 Confidence 100.00% Date Thu Jan 5 12:35:48 GMT 2012 Rank 4 Aligned Residues 471 % Identity 17% Template c1ahuB_ PDB info PDB header:flavoenzyme Chain: B: PDB Molecule:vanillyl-alcohol oxidase; PDBTitle: structure of the octameric flavoenzyme vanillyl-alcohol2 oxidase in complex with p-cresol Resolution 2.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		R	A	A	I	V	D	Q	L	K	E	I	V	G	A	D	R	V	I	T	D	E	T	V	L	K	K	N	S	I	D	R	F	R	K	F	.	.	.	.	P	D	I	H	G	I	Y	T	L	P	I	P	A	A	V	V	K	L	G	S	T	E	Q	V	S	R	V	L	N	F	M	N	A	H	K	I	N	G	V	P	R
Query Conservation																																					.	.	.	.
Alig confidence																																					.	.	.	.
Template Conservation
Template Sequence		F	N	E	F	I	Q	D	I	I	R	I	V	G	S	E	N	V	E	V	I	S	S	K	D	Q	I	V	D	G	S	Y	M	K	P	T	H	T	H	D	P	H	H	V	M	D	Q	D	Y	F	L	A	S	A	I	V	A	P	R	N	V	A	D	V	Q	S	I	V	G	L	A	N	K	F	S	F	P	L	W	P	I
Template Known Secondary structure															G	G	G						S	G	G	G						S	S	S			S	S	S		S	S		S	S		G	G	G	S			S						S	S															T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		81	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																		.
Query SS confidence								.																		.
Query Sequence		T	G	A	S	A	T	.	E	G	G	L	E	T	V	V	E	N	S	V	V	L	D	G	S	.	A	M	N	Q	I	I	N	I	D	I	E	N	M	Q	A	T	A	Q	C	G	V	P	L	E	V	L	E	N	A	L	R	E	K	G	Y	T	T	G	H	S	P	Q	S	K	P	L	A	Q	M	G	G	L	V	A	T
Query Conservation								.																		.
Alig confidence								.																		.
Template Conservation
Template Sequence		S	I	G	R	N	S	G	Y	G	G	A	A	P	R	V	S	G	S	V	V	L	D	M	G	K	N	M	N	R	V	L	E	V	N	V	E	G	A	Y	C	V	V	E	P	G	V	T	Y	H	D	L	H	N	Y	L	E	A	N	N	L	R	D	K	L	W	L	D	V	P	D	L	G	G	G	S	V	L	G	N	A
Template Known Secondary structure		S	S	S			T	T	T	T	T	T			S	S	T	T							T	T	T									T	T	T	T						T	T		B										T	T	T	G	G	G	T							S		S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																													.	.	210
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	I	G	Q	F	S	T	L	Y	G	A	I	E	D	M	V	V	G	L	E	A	V	L	A	D	G	T	V	T	R	I	K	N	V	P	R	R	A	A	G	P	D	I	R	H	I	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	E
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		V	E	R	G	V	G	Y	T	P	Y	G	D	H	W	M	M	H	S	G	M	E	V	V	L	A	N	G	E	L	L	R	T	G	.	.	.	.	M	G	A	L	P	D	P	K	R	P	E	T	M	G	L	K	P	E	D	Q	P	W	S	K	I	A	H	L	F	P	Y	G	F	G	P	Y	I	D	G	L	F	S	Q
Template Known Secondary structure				T		B		S	S	T	T		B	T	G	G	G									T	T	S						G	.	.	.	.	G	G	G	S						T	T	T	T	T			T	T	T					S	G	G	G	T		S			S	S				G	G	G	G	S	S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	L	C	Y	I	T	E	V	T	V	K	I	F	K	F	T	P	E	N	N	L	F	Y	G	Y	.	.	I	L	E	D	M	K	T	G	F	N	I	L	R	E	I	M	V	E	G	Y	R	P	S	I	A	R	L	Y	D	A	E	D	G	T	Q	H	F	T	H	F	A	D	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.																																											.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.																																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	M	G	I	V	T	K	I	G	I	W	L	M	P	N	P	R	G	Y	Q	S	Y	L	I	T	L	P	K	D	G	D	L	K	Q	A	V	D	I	I	R	P	L	R	L	G	M	A	L	Q	N	V	P	T	I	R	H	I	L	L	D	A	A	V	L	G	D	K	R	S	Y	S	S	R	T	E	P	L	S	D
Template Known Secondary structure		S	S	S															S											S	T	T																T		S		S															S		S	T	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
														279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	K	C	V	L	I	F	M	A	E	G	N	P	R	I	A	K	V	T	G	E	G	I	A	E	I	V	A	R	Y	P	Q	C	Q	R	V	D	S	K	L	I	E	T	W	F	N	N	L	N	W	G	P	D	K	V	A	A	E	R	V	Q	I	L	K	T	G	N	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	L	D	K	I	A	K	Q	L	N	L	G	R	W	N	F	Y	G	A	L	Y	G	P	E	P	I	R	R	V	L	W	E	T	I	K	D	A	F	S	A	I	P	G	V	K	F	Y	F	P	E	D	T	P	E	N	S	V	L	R	V	R	D	K	T	M	Q	G	I	P	T	Y	D	E	L	K	W	I	D	W
Template Known Secondary structure												T			S									S																G	G	G	S	T	T						G	G	G	S		S	S										T	T	T					G	G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	T	E	V	S	G	C	W	S	C	I	H	E	I	Y	E	S	V	I	N	R	I	R	T	E	F	P	H	A	D	D	I	T	M	L	G	G	H	S	S	H	S	Y	Q	N	G	T	N	M	Y	F	V	Y	D	Y	N	V	V	D	C	K	P	E	E	E	I	D	K	Y	H	N	P	L	N	K	I	I	C
Query Conservation
Alig confidence																																																															.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		L	P	N	G	A	H	L	F	F	S	P	I	A	K	V	S	G	E	D	A	M	M	Q	Y	A	V	T	K	K	R	C	Q	E	A	G	L	D	F	I	G	T	F	T	V	G	M	R	E	M	H	H	I	V	C	I	V	F	N	K	K	D	.	.	.	.	L	I	Q	K	R	K	V	Q	W	L	M	R	T	L	I
Template Known Secondary structure		S	S	S								B				S																			T	T											S	S	S											T	T		.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.					.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.		.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.			.	480	.	.	.
Predicted Secondary structure																																.																							.	.
Query SS confidence																																.																							.	.
Query Sequence		E	E	T	I	R	L	G	G	S	M	V	H	H	H	G	I	G	K	H	R	V	H	W	S	K	L	E	H	G	S	.	A	W	A	L	L	E	G	L	K	K	Q	F	D	P	N	G	I	M	N	T	G	T	.	.	I	Y	P	I	E
Query Conservation																																.																							.	.
Alig confidence																																.																							.	.
Template Conservation
Template Sequence		D	D	C	A	A	N	G	W	G	E	Y	R	T	H	L	A	F	M	D	Q	I	M	E	T	Y	N	W	N	N	S	S	F	L	R	F	N	E	V	L	K	N	A	V	D	P	N	G	I	I	A	P	G	K	S	G	V	W	P	S	Q
Template Known Secondary structure							T	T			B	S				G	G	G																												T	T			B		T	T	G	G	G				T	T
Template Predicted Secondary structure
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.