 |
| Job Description | P0CF60 | | Confidence | 3.80% | Date | Wed Jan 25 15:20:36 GMT 2012 |
| Rank | 60 | Aligned Residues | 24 |
| % Identity | 17% | Template | d1d5ya2 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| AraC type transcriptional activator
|
| Resolution | 2.70 |
|
|   |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Y | R | S | P | R | E | Y | L | R | Q | R | A | C | N | G | L | S | D | N | R | C | L | E | I |
| Query Conservation |   |
  |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
| Template Sequence |   |
A | Q | T | P | A | L | Y | R | R | S | P | E | W | S | A | F | G | I | R | P | P | L | R | L |
| Template Known Secondary structure |   |
S | S |
|  |  |  |  |  |  |
| S | S |
|
|
| T | T |
|
|
|
|
|
|
|
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|