Job Description P0CF60 Confidence 3.52% Date Wed Jan 25 15:20:36 GMT 2012 Rank 67 Aligned Residues 57 % Identity 16% Template c3pt2A_ PDB info PDB header:hydrolase/protein binding Chain: A: PDB Molecule:rna polymerase; PDBTitle: structure of a viral otu domain protease bound to ubiquitin Resolution 2.50 Å

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		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	K	T	I	K	R	D	Y	I	S	I	M	P	K	P	D	G	L	T	A	A	K	N	L	A	E	A	F	E	H	Y	N	E	W	H	P	H	S	A	L	G	Y	R	S	P	R	E	Y	L	R	Q	R	A	C	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	H	S	I	A	E	L	T	X	P	N	K	T	D	H	S	Y	H	Y	I	K	R	L	T	E	S	A	A	R	K	Y	Y	Q	E	E	P	E	A	R	L	V	G	L	S	L	E	D	Y	L	K	R	X	L	S	D	N
Template Known Secondary structure											S	S	S			T	T	T																G	G	G		T	T																	S	T	T
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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