Job Description P0ABK5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 31 Aligned Residues 299 % Identity 26% Template d1v8za1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.21

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		5	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.									.	.	.	.
Query SS confidence												.									.	.	.	.
Query Sequence		F	E	D	N	S	L	T	I	G	H	.	T	P	L	V	R	L	N	R	.	.	.	.	I	G	N	G	R	I	L	A	K	V	E	S	R	N	P	S	F	S	V	K	C	R	I	G	A	N	M	I	W	D	A	E	K	R	G	V	L	K	P	G	V	E	L	V	E	P	T	S	G	N	T	G	I	A	L	A	Y
Query Conservation												.									.	.	.	.
Alig confidence												.									.	.	.	.																																							.	.	.
Template Conservation																																																															.	.	.
Template Sequence		N	Y	Y	L	K	T	W	A	G	R	P	T	P	L	Y	Y	A	K	R	L	T	E	K	I	G	G	A	K	I	Y	L	K	R	E	D	L	V	H	G	G	A	H	K	T	N	N	A	I	G	Q	A	L	L	A	K	F	M	G	K	T	R	.	.	.	L	I	A	E	T	G	A	G	Q	H	G	V	A	T	A	M
Template Known Secondary structure								T	T			S														T	S	S							G	G	G	S	T	T	S	B	T															T	T				.	.	.						S	S	S
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																	.	.	.																						.																										.	.	.	.	.
Query SS confidence																	.	.	.																						.																										.	.	.	.	.
Query Sequence		V	A	A	A	R	G	Y	K	L	T	L	T	M	P	E	.	.	.	T	M	S	I	E	R	R	K	L	L	K	A	L	G	A	N	L	V	L	T	E	.	G	A	K	G	M	K	G	A	I	Q	K	A	E	E	I	V	A	S	N	P	E	K	Y	L	L	.	.	.	.	.	L	Q	Q	F	S	N	P	A	N	P
Query Conservation																	.	.	.																						.																										.	.	.	.	.
Alig confidence																	.	.	.																						.																										.	.	.	.	.
Template Conservation
Template Sequence		A	G	A	L	L	G	M	K	V	D	I	Y	M	G	A	E	D	V	E	R	Q	K	M	N	V	F	R	M	K	L	L	G	A	N	V	I	P	V	N	S	G	S	R	T	L	K	D	A	I	N	E	A	L	R	D	W	V	A	T	F	E	Y	T	H	Y	L	I	G	S	V	V	G	P	H	P	Y	P	T	I	V
Template Known Secondary structure						T	T													T	T											T	T								S	T	T	S	S																T	T	T							S	S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	H	E	K	T	T	G	P	E	I	W	E	D	T	.	.	.	.	D	G	Q	V	D	V	F	I	A	G	V	G	T	G	G	T	L	T	G	V	S	R	Y	I	K	G	T	K	G	K	T	D	L	I	S	V	A	V	E	P	T	D	S	P	V	I	A	Q	A	L	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.																										.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.
Template Sequence		R	D	F	Q	S	V	I	G	R	E	A	K	A	Q	I	L	E	A	E	G	Q	L	P	D	V	I	V	A	C	V	G	G	G	S	N	A	M	G	I	F	Y	P	F	V	.	.	.	N	D	K	K	V	K	L	V	G	V	E	A	G	G	K	G	L	E	S	G	K	H	S	A	S	L	N	A	G	Q	V	G	V
Template Known Secondary structure																					S	S			S							S	S	S								G	G	G	T	.	.	.	T		T	T	S										T	B	G	G	G	T	B	S
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240				.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
													216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	G	E	E	I	K	P	G	P	H	K	I	Q	G	I	G	A	G	F	I	P	A	N	.	.	.	L	D	L	K	L	V	D	K	V	I	G	I	T	N	E	E	A	I	S	T	A	R	R	L	M	E	E	E	G	I	L	A	G	I	S	S	G	A	A	V	A	A	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation
Template Sequence		F	H	G	M	L	S	Y	F	L	Q	D	E	E	G	Q	I	K	P	T	H	S	I	A	P	G	L	D	Y	P	G	V	G	P	E	H	A	Y	L	K	K	I	Q	R	A	E	Y	V	T	V	T	D	E	E	A	L	K	A	F	H	E	L	S	R	T	E	G	I	I	P	A	L	E	S	A	H	A	V	A	Y	A
Template Known Secondary structure			T	T							B		T	T	S		B						S	S	T	T	S			S	B											T	T	S																							S			B
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	L	Q	E	D	E	S	F	T	N	K	N	I	V	V	I	L	P	S	S	G	E	R	Y	L	S	T	A
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		M	K	L	A	K	E	M	S	.	R	D	E	I	I	I	V	N	L	S	G	R	G	D	K	D	L	D	I	V
Template Known Secondary structure							T	S		.	T	T									B	B	S	G	G	G
Template Predicted Secondary structure										.
Template SS confidence
		354	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions