Job Description P0ABK5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 26 Aligned Residues 300 % Identity 23% Template d1v7ca_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																					.	.	.	.	.
Query SS confidence																					.	.	.	.	.
Query Sequence		E	D	N	S	L	T	I	G	H	T	P	L	V	R	L	N	R	I	G	.	.	.	.	.	N	G	R	I	L	A	K	V	E	S	R	N	P	S	F	S	V	K	C	R	I	G	A	N	M	I	W	D	A	E	K	R	G	V	L	K	P	G	V	E	L	V	E	P	T	S	G	N	T	G	I	A	L	A	Y	V
Query Conservation																					.	.	.	.	.
Alig confidence																					.	.	.	.	.																																					.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		P	V	I	S	L	L	E	G	S	T	P	L	I	P	L	K	G	P	E	E	A	R	K	K	G	I	R	L	Y	A	K	Y	E	G	L	N	P	T	G	S	F	K	D	R	G	M	T	L	A	V	S	K	A	V	E	G	G	A	Q	A	.	.	.	.	V	A	C	A	S	T	G	N	T	A	A	S	A	A	A	Y
Template Known Secondary structure						S																		T	T	T								G	G	G	S	T	T	S	B	T															T	T		S		.	.	.	.						S	S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		A	A	A	R	G	Y	K	L	T	L	T	M	P	E	T	.	M	S	I	E	R	R	K	L	L	K	A	L	G	A	N	L	V	L	T	E	G	A	K	G	M	K	G	A	I	Q	K	A	E	E	I	V	A	S	N	P	E	K	Y	L	L	L	Q	Q	F	S	N	P	A	N	P	E	I	H	E	K	T	T	G	P
Query Conservation																	.
Alig confidence																	.																					.	.																				.	.	.														.
Template Conservation																																						.	.																				.	.	.														.
Template Sequence		A	A	R	A	G	I	L	A	I	V	V	L	P	A	G	Y	V	A	L	G	K	V	A	Q	S	L	V	H	G	A	R	I	V	Q	V	E	.	.	G	N	F	D	D	A	L	R	L	T	Q	K	L	T	E	A	F	P	V	.	.	.	A	L	V	N	S	V	N	P	H	R	L	E	G	.	Q	K	T	L	A	F
Template Known Secondary structure						T									T	T		S											T	T							S	.	.	S																S	S		.	.	.				S	T	T	S							.		T
Template Predicted Secondary structure																																						.	.																				.	.	.														.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.
Predicted Secondary structure																																					.	.	.	.																																			.	.
Query SS confidence																																					.	.	.	.																																			.	.
Query Sequence		E	I	W	E	D	T	D	G	Q	V	D	V	F	I	A	G	V	G	T	G	G	T	L	T	G	V	S	R	Y	I	K	G	T	K	G	.	.	.	.	K	T	D	L	I	S	V	A	V	E	P	T	D	S	P	V	I	A	Q	A	L	A	G	E	E	I	K	P	G	P	H	K	I	Q	.	.	G	I	G	A	G
Query Conservation																																					.	.	.	.																																			.	.
Alig confidence																																					.	.	.	.																																			.	.
Template Conservation
Template Sequence		E	V	V	D	E	L	G	D	A	P	H	Y	H	A	L	P	V	G	N	A	G	N	I	T	A	H	W	M	G	Y	K	A	Y	H	A	L	G	K	A	K	R	L	P	R	M	L	G	F	Q	A	A	G	A	A	P	L	V	L	G	R	P	V	E	R	P	E	T	L	A	T	A	I	R	I	G	N	P	A	S	W
Template Known Secondary structure								S	S			S							S	S	S																T	T	S		S	S										G	G	G						T	S			S	S				S		G	G	G			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		F	I	P	A	N	L	D	L	K	L	V	D	K	V	I	G	I	T	N	E	E	A	I	S	T	A	R	R	L	M	E	E	E	G	I	L	A	G	I	S	S	G	A	A	V	A	A	A	L	K	L	Q	E	D	E	S	F	.	T	N	K	N	I	V	V	I	L	P	S	S	G	E	R	Y	L	S	T	A	L	F
Query Conservation																																																											.
Alig confidence																																																											.
Template Conservation
Template Sequence		Q	G	A	V	R	A	K	E	E	S	G	G	V	I	E	A	V	T	D	E	E	I	L	F	A	Y	R	Y	L	A	R	E	E	G	I	F	C	E	P	A	S	A	A	A	M	A	G	V	F	K	L	L	R	E	G	R	L	E	P	E	S	T	V	V	L	T	L	T	G	H	G	L	K	D	P	A	T	A	E	R
Template Known Secondary structure												T																						T				B																	T	T		S		S	S									B	B	G	G	G		G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		313	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	E
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		330	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions