Job Description P0ABK5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 23 Aligned Residues 302 % Identity 18% Template d1v71a1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 1.70

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		M	S	K	I	F	E	D	N	S	L	T	I	G	H	T	P	L	V	R	L	N	R	I	G	.	.	.	N	G	R	I	L	A	K	V	E	S	R	N	P	S	F	S	V	K	C	R	I	G	A	N	M	I	W	D	A	E	K	R	G	V	L	K	P	G	V	E	L	V	E	P	T	S	G	N	T	G	I	A	L
Query Conservation																										.	.	.
Alig confidence																										.	.	.																																					.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		V	A	S	A	S	E	R	I	K	K	F	A	N	K	T	P	V	L	T	S	S	T	V	N	K	E	F	V	A	E	V	F	F	K	C	E	N	F	Q	K	M	G	A	F	K	F	R	G	A	L	N	A	L	S	Q	L	N	E	A	Q	R	K	A	.	.	.	G	V	L	T	F	S	S	G	N	H	A	Q	A	I
Template Known Secondary structure										T	T	T	S																T	S							G	G	G	S	G	G	G	B	T										T	T									.	.	.							S	S
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	V	A	A	A	R	G	Y	K	L	T	L	T	M	P	E	T	M	S	I	E	R	R	K	L	L	K	A	L	G	A	N	L	V	L	T	E	G	A	K	G	M	K	G	A	I	Q	K	A	E	E	I	V	A	S	N	P	E	K	Y	L	L	L	Q	Q	F	S	N	P	A	N	P	E	I	H	E	K	T	T
Query Conservation
Alig confidence																																									.	.																.	.																		.
Template Conservation																																									.	.																.	.																		.
Template Sequence		A	L	S	A	K	I	L	G	I	P	A	K	I	I	M	P	L	D	A	P	E	A	K	V	A	A	T	K	G	Y	G	G	Q	V	I	M	Y	D	R	.	.	Y	K	D	D	R	E	K	M	A	K	E	I	S	E	R	.	.	E	G	L	T	I	I	P	P	Y	D	H	P	H	V	L	A	G	.	Q	G	T	A
Template Known Secondary structure								T	T									T	T												T	T								T	.	.	T	T	T													.	.		T		B				S	S	S	S							.		T
Template Predicted Secondary structure																																									.	.																.	.																		.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		G	P	E	I	W	E	D	T	D	G	Q	V	D	V	F	I	A	G	V	G	T	G	G	T	L	T	G	V	S	R	Y	I	K	G	T	K	G	K	T	D	L	I	S	V	A	V	E	P	T	D	S	P	V	I	A	Q	A	L	A	G	E	E	I	K	P	.	.	.	G	P	H	K	I	Q	G	I	G	A	G	F
Query Conservation																																																																			.	.	.
Alig confidence											.																													.	.																										.	.	.
Template Conservation											.																													.	.
Template Sequence		A	K	E	L	F	E	E	V	G	.	P	L	D	A	L	F	V	C	L	G	G	G	G	L	L	S	G	S	A	L	A	A	R	H	F	A	P	N	.	.	C	E	V	Y	G	V	E	P	E	A	G	N	D	G	Q	Q	S	F	R	K	G	S	I	V	H	I	D	T	P	K	T	I	A	D	G	A	Q	T	Q	H
Template Known Secondary structure											.			S							S	S	S															T	T	.	.									G	G	G										T	S										S		T	T	S			S	S
Template Predicted Secondary structure											.																													.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		235	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		I	P	A	N	.	.	.	L	D	L	K	L	V	D	K	V	I	G	I	T	N	E	E	A	I	S	T	A	R	R	L	M	E	E	E	G	I	L	A	G	I	S	S	G	A	A	V	A	A	A	L	K	L	Q	E	D	E	S	F	T	N	K	N	I	V	V	I	L	P	S	S	G	E	R	Y	L	S	T	A	L
Query Conservation						.	.	.
Alig confidence						.	.	.																																																		.	.															.	.	.
Template Conservation																																																										.	.															.	.	.
Template Sequence		L	G	N	Y	T	F	S	I	I	K	E	K	V	D	D	I	L	T	V	S	D	E	E	L	I	D	C	L	K	F	Y	A	A	R	M	K	I	V	V	E	P	T	G	C	L	S	F	A	A	A	R	A	M	K	E	K	.	.	L	K	N	K	R	I	G	I	I	I	S	G	G	N	.	.	.	V	D	I	E	R
Template Known Secondary structure																																				T						G	G	G	G									T	G	G	G	.	.	G	T	T									B			.	.	.
Template Predicted Secondary structure																																																										.	.															.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.				.	.	.	.	.
		312	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	D	L	F	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	H	F	L	S	Q
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions