Job Description P0ABK5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 40 Aligned Residues 291 % Identity 16% Template d1kl7a_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.70

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60										.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.
Predicted Secondary structure																								.																									.	.	.	.	.	.	.	.	.																					.
Query SS confidence																								.																									.	.	.	.	.	.	.	.	.																					.
Query Sequence		T	P	L	V	R	L	N	R	I	G	N	G	R	I	L	A	K	V	E	S	R	N	.	P	S	F	S	V	K	C	R	I	G	A	N	M	I	W	D	A	E	K	R	G	V	L	K	.	.	.	.	.	.	.	.	.	P	G	V	E	L	V	E	P	T	S	G	N	T	G	I	A	L	A	Y	V	.	A	A	A
Query Conservation																								.																									.	.	.	.	.	.	.	.	.																					.
Alig confidence																		.						.																									.	.	.	.	.	.	.	.	.																					.
Template Conservation																		.
Template Sequence		T	P	L	V	Q	N	V	T	G	D	K	E	N	L	H	I	.	L	E	L	F	H	G	P	T	Y	A	F	K	D	V	A	L	Q	F	V	G	N	L	F	E	Y	F	L	Q	R	T	N	A	N	L	P	E	G	E	K	K	Q	I	T	V	V	G	A	T	S	G	D	T	G	S	A	A	I	Y	G	L	R	G	K
Template Known Secondary structure		S						T	T		S	S	S					.						S	T	T	S	B	T																					T	T	S		S	S	S											S	S	S										T	T
Template Predicted Secondary structure																		.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.
Predicted Secondary structure														.															.																																												.	.
Query SS confidence														.															.																																												.	.
Query Sequence		R	G	Y	K	L	T	L	T	M	P	E	T	.	M	S	I	E	R	R	K	L	L	K	A	L	G	A	.	N	L	V	L	T	E	G	A	K	G	M	K	G	A	I	Q	K	A	E	E	I	V	A	S	N	P	E	K	Y	L	L	L	Q	Q	F	S	N	P	A	N	P	E	I	.	.	H	E	K	T	T	G	P
Query Conservation														.															.																																												.	.
Alig confidence														.															.																																		.	.									.	.
Template Conservation																																																															.	.
Template Sequence		K	D	V	S	V	F	I	L	Y	P	T	G	R	I	S	P	I	Q	E	E	Q	X	T	T	V	P	D	E	N	V	Q	T	L	S	V	T	G	T	F	D	N	C	Q	D	I	V	K	A	I	F	G	D	K	E	F	N	H	N	V	G	A	.	.	V	N	S	I	N	W	A	R	I	L	A	Q	X	T	Y	Y	F
Template Known Secondary structure		T	T									T	T	S	S														T	T							S	S																S	S					B			.	.			S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure								.	.	.	.																																																																						.
Query SS confidence								.	.	.	.																																																																						.
Query Sequence		E	I	W	E	D	T	.	.	.	.	D	G	Q	V	D	V	F	I	A	G	V	G	T	G	G	T	L	T	G	V	S	R	Y	I	K	G	T	K	G	K	T	D	L	I	S	V	A	V	E	P	T	D	S	P	V	I	A	Q	A	L	A	G	E	E	I	K	P	G	P	H	K	I	Q	G	I	G	A	G	F	.
Query Conservation								.	.	.	.																																																																						.
Alig confidence								.	.	.	.																																		.	.									.																										.
Template Conservation																																													.	.									.
Template Sequence		Y	S	F	F	Q	A	T	N	G	K	D	S	K	K	V	K	F	V	V	P	S	G	N	F	G	D	I	L	A	G	Y	F	A	K	K	X	G	L	P	I	E	K	L	.	.	A	I	A	T	N	E	N	D	.	I	L	D	R	F	L	K	S	G	L	Y	E	R	S	D	K	V	A	A	T	L	S	P	A	X	D
Template Known Secondary structure									S	S	S	S											S	S	S													T							.	.						S			.									S						S	S					S		G	G	G
Template Predicted Secondary structure																																													.	.									.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.			.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
				235	.	.	.	.	240	.	.																																														.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		.	.	I	P	A	N	L	D	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	D	K	V	I	G	I	T	N	E	E	A	I	S	T	A	R	R	L	M	E	E	E	.
Query Conservation		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		I	L	I	S	S	N	F	E	R	L	L	W	Y	L	A	R	E	Y	L	A	N	G	D	D	L	K	A	G	E	I	V	N	N	W	F	Q	E	L	K	T	N	G	K	F	Q	V	D	K	S	I	I	E	G	A	S	K	D	F	T	S	E	R	V	S	N	E	E	T	S	E	T	I	K	K	I	Y	E	S	S	V
Template Known Secondary structure			S	S		T	T													T	S	T	T																				S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
					267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	I	L	A	G	I	S	S	G	A	A	V	A	A	A	L	K	L	Q	E	D	E	S	F	T	N	K	N	I	V	V	I	L	P	S	S	G	E	R	Y	L	S	T	A	L
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		N	P	K	H	Y	I	L	D	P	H	T	A	V	G	V	C	A	T	E	R	L	I	A	K	D	N	D	K	S	I	Q	Y	I	S	L	S	T	A	H	P	A	K	F	A	D	A	V	N
Template Known Secondary structure		S	S	T	T																								T	T	S								B		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions