Job Description P0ABK5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 39 Aligned Residues 286 % Identity 14% Template c3v7nA_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine synthase; PDBTitle: crystal structure of threonine synthase (thrc) from from burkholderia2 thailandensis Resolution 1.40 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																		.	.	.																																			.
Query SS confidence																																		.	.	.																																			.
Query Sequence		T	P	L	V	R	L	N	R	I	G	N	G	R	I	L	A	K	V	E	S	R	N	P	S	F	S	V	K	C	R	I	G	.	.	.	A	N	M	I	W	D	A	E	K	R	G	V	L	K	P	G	V	E	L	V	E	P	T	S	G	N	T	G	I	A	L	A	Y	V	.	A	A	A	R	G	Y	K	L	T	L
Query Conservation																																		.	.	.																																			.
Alig confidence																																		.	.	.												.	.																						.
Template Conservation																																																.	.
Template Sequence		T	P	L	T	T	L	G	T	E	N	G	A	P	V	S	L	L	E	L	S	N	G	P	T	L	A	F	K	D	M	A	M	Q	L	L	G	N	L	F	E	Y	T	L	A	K	H	.	.	G	E	T	L	N	I	L	G	A	T	S	G	D	T	G	S	A	A	E	Y	A	M	R	G	K	E	G	V	R	V	F	M
Template Known Secondary structure		S									T	T											S	T	T	S	B	T																		T	T	.	.	T										S	S											T	T		T	T
Template Predicted Secondary structure																																																.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		91	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure							.															.																									.	.	.	.
Query SS confidence							.															.																									.	.	.	.
Query Sequence		T	M	P	E	T	.	M	S	I	E	R	R	K	L	L	K	A	L	G	A	.	N	L	V	L	T	E	G	A	K	G	M	K	G	A	I	Q	K	A	E	E	I	V	A	S	.	.	.	.	N	P	E	K	Y	L	L	L	Q	Q	F	S	N	P	A	N	P	E	I	H	E	K	T	T	G	P	E	I	W	E	D
Query Conservation							.															.																									.	.	.	.
Alig confidence							.															.																									.	.	.	.												.								.
Template Conservation																																																														.								.
Template Sequence		L	S	P	H	K	K	M	S	A	F	Q	T	A	Q	M	Y	S	L	Q	D	P	N	I	F	N	L	A	V	N	G	V	F	D	D	C	Q	D	I	V	K	A	V	S	N	D	H	A	F	K	A	Q	Q	K	I	G	T	V	N	S	I	.	N	W	A	R	V	V	A	.	Q	V	V	Y	Y	F	K	G	Y	F	A
Template Known Secondary structure					T	T		S										T				T	T								S														T								T	T					S	T	T	.								.
Template Predicted Secondary structure																																																														.								.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.
		165	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.
Predicted Secondary structure						.	.	.																																																									.	.	.										.	.	.	.	.
Query SS confidence						.	.	.																																																									.	.	.										.	.	.	.	.
Query Sequence		T	D	G	Q	.	.	.	V	D	V	F	I	A	G	V	G	T	G	G	T	L	T	G	V	S	R	Y	I	K	G	T	K	G	K	T	D	L	I	S	V	A	V	E	P	T	D	S	P	V	I	A	Q	A	L	A	G	E	E	I	K	P	G	P	.	.	.	H	K	I	Q	G	I	G	A	G	.	.	.	.	.
Query Conservation						.	.	.																																																									.	.	.										.	.	.	.	.
Alig confidence						.	.	.																											.	.	.																												.	.	.										.	.	.	.	.
Template Conservation																																			.	.	.
Template Sequence		A	T	R	S	N	D	E	R	V	S	F	T	V	P	S	G	N	F	G	N	V	C	A	G	H	I	A	R	M	M	G	L	P	.	.	.	I	E	K	L	V	V	A	T	N	E	N	D	V	L	D	E	F	F	R	T	G	A	Y	R	V	A	S	N	F	E	R	F	V	F	D	L	L	G	R	D	P	A	R	V
Template Known Secondary structure		T		S	S	T	T								G	G	G														T	T			.	.	.									T	T											S																T	T	T
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
																			234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	P	A	N	L	D	L	K	L	V	D	K	V	I	G	I	T	N	E	E	A	I	S	T	A	R	R	L	M	E	E	E	G	I	L	A	G	I	S	S	G	A	A	V	A	A	A	L	K	L	Q	E	D	E	S	F	T	N	K	N	I	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		V	Q	L	F	R	D	V	E	Q	K	G	G	F	D	L	A	A	S	G	D	F	A	R	V	A	E	F	G	F	V	S	G	R	S	T	H	A	D	R	I	A	T	I	R	D	V	F	E	R	Y	R	T	M	I	D	T	H	T	A	D	G	L	K	V	A	R	E	H	.	.	.	.	L	R	P	G	V	P	M	V
Template Known Secondary structure												S				T	T	T	T	T		T						T	T																						S																T	T	S	.	.	.	.			T	T	S
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.					.	.	420	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	P	S	S	G	E	R	Y	L	S	T	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	E	T	A	Q	P	I	K	F	G	E	S	I	R
Template Known Secondary structure						B		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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