Job Description P0ABK5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 17 Aligned Residues 302 % Identity 23% Template c3l6cA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:serine racemase; PDBTitle: x-ray crystal structure of rat serine racemase in complex with2 malonate a potent inhibitor Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		M	S	K	I	F	E	D	N	S	L	T	I	G	H	T	P	L	V	R	L	N	R	I	G	.	.	.	N	G	R	I	L	A	K	V	E	S	R	N	P	S	F	S	V	K	C	R	I	G	A	N	M	I	W	D	A	E	K	R	G	V	L	K	P	G	V	E	L	V	E	P	T	S	G	N	T	G	I	A	L
Query Conservation																										.	.	.
Alig confidence																										.	.	.
Template Conservation
Template Sequence		V	E	K	A	H	L	N	I	Q	D	S	V	H	L	T	P	V	L	T	S	S	I	L	N	Q	I	A	G	R	N	L	F	F	K	C	E	L	F	Q	K	T	G	S	F	K	I	R	G	A	L	N	A	I	R	G	L	I	P	D	T	L	E	G	K	P	K	A	V	V	T	H	S	S	G	N	H	G	Q	A	L
Template Known Secondary structure										T	T	T	S																T	S							G	G	G	S	G	G	G	B	T	T												S		S	S	S	T	T			S							S	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	V	A	A	A	R	G	Y	K	L	T	L	T	M	P	E	T	M	S	I	E	R	R	K	L	L	K	A	L	G	A	N	L	V	L	T	E	G	A	K	G	M	K	G	A	I	Q	K	A	E	E	I	V	A	S	N	P	E	K	Y	L	L	L	Q	Q	F	S	N	P	A	N	P	E	I	H	E	K	T	T
Query Conservation
Alig confidence																																									.	.																.	.																	.
Template Conservation																																									.	.																.	.																	.
Template Sequence		T	Y	A	A	K	L	E	G	I	P	A	Y	I	V	V	P	Q	T	A	P	N	C	K	K	L	A	I	Q	A	Y	G	A	S	I	V	Y	S	E	P	.	.	S	D	E	S	R	E	N	V	A	Q	R	I	I	Q	E	.	.	T	E	G	I	L	V	H	P	N	Q	E	P	A	V	I	A	.	G	Q	G	T	I
Template Known Secondary structure								T	T									T	T	S											T	T								S	.	.	S															.	.		T						S	S	S	S						.			T
Template Predicted Secondary structure																																									.	.																.	.																	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		G	P	E	I	W	E	D	T	D	G	Q	V	D	V	F	I	A	G	V	G	T	G	G	T	L	T	G	V	S	R	Y	I	K	G	T	K	G	K	T	D	L	I	S	V	A	V	E	P	T	D	S	P	V	I	A	Q	A	L	A	G	E	E	I	K	P	.	.	.	.	G	P	H	K	I	Q	G	I	G	A	G
Query Conservation																																																																			.	.	.	.
Alig confidence											.																													.	.																										.	.	.	.
Template Conservation											.																													.	.
Template Sequence		A	L	E	V	L	N	Q	V	P	.	L	V	D	A	L	V	V	P	V	G	G	G	G	M	V	A	G	I	A	I	T	I	K	T	L	K	P	S	.	.	V	K	V	Y	A	A	E	P	S	N	A	D	D	C	Y	Q	S	K	L	K	G	E	L	T	P	N	L	H	P	P	E	T	I	A	D	G	V	K	S	S
Template Known Secondary structure										T	.	T									S	S	S															T	T	.	.	S								G	G	G										T	S					S	S					S		G	G	G		S
Template Predicted Secondary structure											.																													.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		234	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		F	I	P	.	.	A	N	L	D	L	K	L	V	D	K	V	I	G	I	T	N	E	E	A	I	S	T	A	R	R	L	M	E	E	E	G	I	L	A	G	I	S	S	G	A	A	V	A	A	A	L	K	L	Q	E	D	E	S	F	T	N	K	N	I	V	V	I	L	P	S	S	G	E	R	Y	L	S	T	A
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		I	G	L	N	T	W	P	I	I	R	D	L	V	D	D	V	F	T	V	T	E	D	E	I	K	Y	A	T	Q	L	V	W	E	R	M	K	L	L	I	E	P	T	A	G	V	G	L	A	A	V	L	S	Q	H	F	Q	T	V	S	P	E	V	K	N	I	C	I	V	L	S	G	G	N	V	D	L	T	S	L
Template Known Secondary structure				T	T	T																																				G	G	G	G							T	S	T	G	G	G	G	S		T	T										B					S	S
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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