Job Description P0ABK5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 19 Aligned Residues 300 % Identity 19% Template c3iauA_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine deaminase; PDBTitle: the structure of the processed form of threonine deaminase isoform 22 from solanum lycopersicum Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		N	S	L	T	I	G	H	T	P	L	V	R	L	N	R	I	G	.	.	.	N	G	R	I	L	A	K	V	E	S	R	N	P	S	F	S	V	K	C	R	I	G	A	N	M	I	W	D	A	E	K	R	G	V	L	K	P	G	V	E	L	V	E	P	T	S	G	N	T	G	I	A	L	A	Y	V	A	A	A	R
Query Conservation																			.	.	.
Alig confidence																			.	.	.																			.																		.	.	.
Template Conservation																																								.																		.	.	.
Template Sequence		V	Y	D	V	A	I	E	S	P	L	E	L	A	E	K	L	S	D	R	L	G	V	N	F	Y	I	K	R	E	D	K	Q	R	V	F	S	F	L	.	R	G	A	Y	N	M	M	S	N	L	S	R	E	E	L	D	K	.	.	.	G	V	I	T	A	S	A	G	N	H	A	Q	G	V	A	L	A	G	Q	R	L
Template Known Secondary structure		G	G	G	T																	T	S							G	G	G	S	T	T	S	B			.									T	S								.	.	.							S	S													T
Template Predicted Secondary structure																																								.																		.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	K	L	T	L	T	M	P	E	T	M	S	I	E	R	R	K	L	L	K	A	L	G	A	N	L	V	L	T	E	G	A	K	G	M	K	G	A	I	Q	K	A	E	E	I	V	A	S	N	P	E	K	Y	L	L	L	Q	Q	F	S	N	P	A	N	P	E	I	H	E	K	T	T	G	P	E	I	W	E	D
Query Conservation
Alig confidence																																		.	.																.	.																		.
Template Conservation																																		.	.																.	.																		.
Template Sequence		N	C	V	A	K	I	V	M	P	T	T	T	P	Q	I	K	I	D	A	V	R	A	L	G	G	D	V	V	L	Y	G	K	.	.	T	F	D	E	A	Q	T	H	A	L	E	L	S	E	K	.	.	D	G	L	K	Y	I	P	P	F	D	D	P	G	V	I	K	G	.	Q	G	T	I	G	T	E	I	N	R	Q
Template Known Secondary structure		T									T	T												T	T								S	.	.	S															.	.		T						S	S	S	S							.
Template Predicted Secondary structure																																		.	.																.	.																		.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.
Predicted Secondary structure																																																										.	.	.																.	.	.
Query SS confidence																																																										.	.	.																.	.	.
Query Sequence		T	D	G	Q	V	D	V	F	I	A	G	V	G	T	G	G	T	L	T	G	V	S	R	Y	I	K	G	T	K	G	K	T	D	L	I	S	V	A	V	E	P	T	D	S	P	V	I	A	Q	A	L	A	G	E	E	I	.	.	.	K	P	G	P	H	K	I	Q	G	I	G	A	G	F	I	.	.	.	P	A	N
Query Conservation																																																										.	.	.																.	.	.
Alig confidence				.																													.	.																								.	.	.																.	.	.
Template Conservation				.																													.	.
Template Sequence		L	K	.	D	I	H	A	V	F	I	P	V	G	G	G	G	L	I	A	G	V	A	T	F	F	K	Q	I	A	P	N	.	.	T	K	I	I	G	V	E	P	Y	G	A	A	S	M	T	L	S	L	H	E	G	H	R	V	K	L	S	N	V	D	T	F	A	D	G	V	A	V	A	L	V	G	E	Y	T	F	A
Template Known Secondary structure				.	S									S	S	S														S	T	T	.	.	S								G	G	G										T	S					S					S	S	G	G	G			S	S
Template Predicted Secondary structure				.																													.	.
Template SS confidence
		206	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	L	K	L	V	D	K	V	I	G	I	T	N	E	E	A	I	S	T	A	R	R	L	M	E	E	E	G	I	L	A	G	I	S	S	G	A	A	V	A	A	A	L	K	L	Q	E	D	E	S	F	T	N	K	N	I	V	V	I	L	P	S	S	G	E	R	Y	L	S	T	A	L	F	A	D	L	F	T	E
Query Conservation
Alig confidence																																																																	.
Template Conservation																																																																	.
Template Sequence		K	C	Q	E	L	I	D	G	M	V	L	V	A	N	D	G	I	S	A	A	I	K	D	V	Y	D	E	G	R	N	I	L	E	T	S	G	A	V	A	I	A	G	A	A	A	Y	C	E	F	Y	K	I	K	N	E	N	I	V	A	I	A	S	G	.	A	N	M	D	F	S	K	L	H	K	V	T	E	L	A	G
Template Known Secondary structure																														S																					T	T			S									B	.					G	G	G									T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		319	320
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		362	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions