Job Description P0ABK5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 29 Aligned Residues 299 % Identity 23% Template c2rkbE_ PDB info PDB header:lyase Chain: E: PDB Molecule:serine dehydratase-like; PDBTitle: serine dehydratase like-1 from human cancer cells Resolution 2.80 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		L	T	I	G	H	T	P	L	V	R	L	N	R	I	G	.	.	.	N	G	R	I	L	A	K	V	E	S	R	N	P	S	F	S	V	K	C	R	I	G	A	N	M	I	W	D	A	E	K	R	G	V	L	K	P	G	V	E	L	V	E	P	T	S	G	N	T	G	I	A	L	A	Y	V	A	A	A	R	G	Y
Query Conservation																	.	.	.
Alig confidence																	.	.	.																																					.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		P	F	H	V	V	T	P	L	L	E	S	W	A	L	S	Q	V	A	G	M	P	V	F	L	K	C	E	N	V	Q	P	S	G	S	F	K	I	R	G	I	G	H	F	C	Q	E	M	A	K	K	G	C	R	H	.	.	.	.	L	V	C	S	S	G	G	N	A	G	I	A	A	A	Y	A	A	R	K	L	G	I
Template Known Secondary structure			S	S																T	S							G	G	G	S	T	T	S	B	T															T	T				.	.	.	.							S														T
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	T	L	T	M	P	E	T	M	S	I	E	R	R	K	L	L	K	A	L	G	A	N	L	V	L	T	E	G	A	K	G	M	K	G	A	I	Q	K	A	E	E	I	V	A	S	N	P	E	K	Y	L	L	L	Q	Q	F	S	N	P	A	N	P	E	I	H	E	K	T	T	G	P	E	I	W	E	D	T	D
Query Conservation
Alig confidence																																.	.																.	.																		.
Template Conservation																																.	.																.	.																		.
Template Sequence		P	A	T	I	V	L	P	E	S	T	S	L	Q	V	V	Q	R	L	Q	G	E	G	A	E	V	Q	L	T	G	K	.	.	V	W	D	E	A	N	L	R	A	Q	E	L	A	K	R	.	.	D	G	W	E	N	V	P	P	F	D	H	P	L	I	W	K	G	.	H	A	S	L	V	Q	E	L	K	A	V	L	R
Template Known Secondary structure									T	T												T	T								S	.	.	S														S	.	.	T	T						S	S		S							.												S	S
Template Predicted Secondary structure																																.	.																.	.																		.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.				.	240
Predicted Secondary structure																																																												.	.	.															.	.	.
Query SS confidence																																																												.	.	.															.	.	.
Query Sequence		G	Q	V	D	V	F	I	A	G	V	G	T	G	G	T	L	T	G	V	S	R	Y	I	K	G	T	K	G	K	T	D	L	I	S	V	A	V	E	P	T	D	S	P	V	I	A	Q	A	L	A	G	E	E	I	K	P	G	P	.	.	.	H	K	I	Q	G	I	G	A	G	F	I	P	A	N	.	.	.	L	D
Query Conservation																																																												.	.	.															.	.	.
Alig confidence																																.																												.	.	.															.	.	.
Template Conservation																																.
Template Sequence		T	P	P	G	A	L	V	L	A	V	G	G	G	G	L	L	A	G	V	V	A	G	L	L	E	V	G	W	Q	H	.	V	P	I	I	A	M	E	T	H	G	A	H	C	F	N	A	A	I	T	A	G	K	L	V	T	L	P	D	I	T	S	V	A	K	S	L	G	A	K	T	V	A	A	R	A	L	E	C	M
Template Known Secondary structure		S			S							S	S	S														T		T	T	.	S								T	T	B										T	S					S				S	S		G	G	G			S	S								G	G
Template Predicted Secondary structure																																.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.								.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.
Query Sequence		L	K	L	V	D	K	V	I	G	I	T	N	E	E	A	I	S	T	A	R	R	L	M	E	E	E	G	I	L	A	G	I	S	S	G	A	A	V	A	A	A	L	K	L	Q	E	D	.	.	.	.	.	.	.	E	S	F	T	N	K	N	I	V	V	I	L	P	S	S	G	E	R	Y	L	S	T	A	L	F	A
Query Conservation																																																	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.																		.	.
Template Conservation																																																																									.	.
Template Sequence		Q	V	C	K	I	H	S	E	V	V	E	D	T	E	A	V	S	A	V	Q	Q	L	L	D	D	E	R	M	L	V	E	P	A	C	G	A	A	L	A	A	I	Y	S	G	L	L	R	R	L	Q	A	E	G	C	L	P	P	S	L	T	S	V	V	V	I	V	C	G	G	N	N	.	.	I	N	S	R	E	L	Q
Template Known Secondary structure		G	T	S																																								T	S								T	T	S	S		S	S		S								B		S	S	.	.
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320
		314	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	F	T	E	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	K	T	H	L	G
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions