Job Description P0ABK5 Confidence 100.00% Date Wed Jan 25 15:20:22 GMT 2012 Rank 18 Aligned Residues 304 % Identity 20% Template c2d1fA_ PDB info PDB header:lyase Chain: A: PDB Molecule:threonine synthase; PDBTitle: structure of mycobacterium tuberculosis threonine synthase Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		M	S	K	I	F	E	D	N	S	L	T	I	G	H	T	P	L	V	R	L	N	R	I	G	.	.	.	N	G	R	I	L	A	K	V	E	S	R	N	P	S	F	S	V	K	C	R	I	G	A	N	M	I	W	D	A	E	K	R	G	V	L	K	P	G	V	E	L	V	E	P	T	S	G	N	T	G	I	A	L
Query Conservation																										.	.	.
Alig confidence																										.	.	.																																					.	.	.	.
Template Conservation																																																																	.	.	.	.
Template Sequence		V	G	D	D	W	T	P	V	T	L	L	E	G	G	T	P	L	I	A	A	T	N	L	S	K	Q	T	G	C	T	I	H	L	K	V	E	G	L	N	P	T	G	S	F	K	D	R	G	M	T	M	A	V	T	D	A	L	A	H	G	Q	R	A	.	.	.	.	V	L	C	A	S	T	G	N	T	S	A	S	A
Template Known Secondary structure				S	S																								S	S							G	G	G	S	T	T	S	B	T	T														T	T		S		.	.	.	.						S	S
Template Predicted Secondary structure																																																																	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		A	Y	V	A	A	A	R	G	Y	K	L	T	L	T	M	P	E	.	T	M	S	I	E	R	R	K	L	L	K	A	L	G	A	N	L	V	L	T	E	G	A	K	G	M	K	G	A	I	Q	K	A	E	E	I	V	A	S	N	P	E	K	Y	L	L	L	Q	Q	F	S	N	P	A	N	P	E	I	H	E	K	T
Query Conservation																			.
Alig confidence																			.																							.	.																.	.																		.
Template Conservation																																										.	.																.	.																		.
Template Sequence		A	A	Y	A	A	R	A	G	I	T	C	A	V	L	I	P	Q	G	K	I	A	M	G	K	L	A	Q	A	V	M	H	G	A	K	I	I	Q	I	D	G	.	.	N	F	D	D	C	L	E	L	A	R	K	M	A	A	D	.	.	F	P	T	I	S	L	V	N	S	V	N	P	V	R	I	E	G	.	Q	K	T
Template Known Secondary structure									T									S	S													T	T							S	S	.	.																.	.		T	T					S	T	T								.		T
Template Predicted Secondary structure																																										.	.																.	.																		.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230
Predicted Secondary structure																																						.	.	.	.																																		.	.
Query SS confidence																																						.	.	.	.																																		.	.
Query Sequence		T	G	P	E	I	W	E	D	T	D	G	Q	V	D	V	F	I	A	G	V	G	T	G	G	T	L	T	G	V	S	R	Y	I	K	G	T	.	.	.	.	K	G	K	T	D	L	I	S	V	A	V	E	P	T	D	S	P	V	I	A	Q	A	L	A	G	E	E	I	K	P	G	P	H	.	.	K	I	Q	G	I
Query Conservation																																						.	.	.	.																																		.	.
Alig confidence																																						.	.	.	.																																		.	.
Template Conservation
Template Sequence		A	A	F	E	I	V	D	V	L	G	T	A	P	D	V	H	A	L	P	V	G	N	A	G	N	I	T	A	Y	W	K	G	Y	T	E	Y	H	Q	L	G	L	I	D	K	L	P	R	M	L	G	T	Q	A	A	G	A	A	P	L	V	L	G	E	P	V	S	H	P	E	T	I	A	T	A	I	R	I	G	S	P
Template Known Secondary structure											S	S			S							S	S	S																T	T	S		S	S										G	G	G						S	S			S	S				S		G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		G	A	G	F	I	P	A	N	L	D	L	K	L	V	D	K	V	I	G	I	T	N	E	E	A	I	S	T	A	R	R	L	M	E	E	E	G	I	L	A	G	I	S	S	G	A	A	V	A	A	A	L	K	L	Q	E	D	E	S	F	.	T	N	K	N	I	V	V	I	L	P	S	S	G	E	R	Y	L	S	T
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		A	S	W	T	S	A	V	E	A	Q	Q	Q	S	K	G	R	F	L	A	A	S	D	E	E	I	L	A	A	Y	H	L	V	A	R	V	E	G	V	F	V	E	P	A	S	A	A	S	I	A	G	L	L	K	A	I	D	D	G	W	V	A	R	G	S	T	V	V	C	T	V	T	G	N	G	L	K	D	P	D	T
Template Known Secondary structure		T	T												T																										B																		T	S	S		T	T									B	B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	K	D
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions