Job Description P0A7X3 Confidence 100.00% Date Thu Jan 5 11:06:23 GMT 2012 Rank 4 Aligned Residues 128 % Identity 25% Template c2xzmI_ PDB info PDB header:ribosome Chain: I: PDB Molecule:rps16e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		A	E	N	Q	Y	Y	G	T	G	R	R	K	S	S	A	A	R	V	F	I	K	P	G	N	G	K	I	V	I	N	Q	R	S	L	E	Q	Y	F	G	R	E	T	A	R	M	V	V	R	Q	P	L	E	L	V	D	M	V	.	.	E	K	L	D	L	Y	I	T	V	K	G	G	G	I	S	G	Q	A	G	A	I
Query Conservation																																																											.	.
Alig confidence																																									.																		.	.
Template Conservation																																									.
Template Sequence		K	P	Q	L	V	Q	T	F	G	R	K	K	N	A	V	A	V	A	S	V	R	P	G	K	G	L	L	K	V	N	G	S	P	I	D	M	I	N	P	.	Q	I	L	Q	A	K	I	Y	E	P	I	L	L	L	G	Q	Q	K	F	A	N	L	D	I	R	I	R	V	R	G	S	G	Y	T	S	Q	V	Y	A	I
Template Known Secondary structure				S									T	T										S	S						S	S	S	B	G	G	G		S	S	.	T	T	T																												S	S
Template Predicted Secondary structure																																									.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.												.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	H	G	I	T	R	A	L	M	E	Y	D	E	S	L	.	.	.	.	.	.	.	.	.	.	.	R	S	E	L	R	K	A	G	F	V	T	R	D	A	R	Q	V	E	R	K	K	V	G	L	R	K	A	R	R	R	P	Q	F	S	K	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	A	L	S	K	G	I	V	A	Y	H	A	K	Y	V	D	E	N	S	K	R	E	I	K	E	Q	L	M	Q	Y	D	R	S	L	L	V	A	D	P	R	R	M	E	P	K	K	C	G	G	R	G	A	R	S	K	M	Q	K	A	Y	R
Template Known Secondary structure																	S																	S	T	T	T	S		B									T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions