Job Description P0A7X3 Confidence 100.00% Date Thu Jan 5 11:06:23 GMT 2012 Rank 6 Aligned Residues 125 % Identity 36% Template c1s1hI_ PDB info PDB header:ribosome Chain: I: PDB Molecule:40s ribosomal protein s16; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1h,4 contains 40s subunit. the 60s ribosomal subunit is in file5 1s1i. Resolution 11.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		Q	Y	Y	G	T	G	R	R	K	S	S	A	A	R	V	F	I	K	P	G	N	G	K	I	V	I	N	Q	R	S	L	E	Q	Y	F	G	R	E	T	A	R	M	V	V	R	Q	P	L	E	L	V	.	.	D	M	V	E	K	L	D	L	Y	I	T	V	K	G	G	G	I	S	G	Q	A	G	A	I	R	H	G
Query Conservation																																																					.	.
Alig confidence																																						.															.	.
Template Conservation																																						.
Template Sequence		S	V	Q	T	F	G	K	K	K	S	A	T	A	V	A	H	V	K	A	G	K	G	L	I	K	V	N	G	S	P	I	T	L	V	E	P	.	E	I	L	R	F	K	V	Y	E	P	L	L	L	V	G	L	D	K	F	S	N	I	D	I	R	V	R	V	T	G	G	G	H	V	S	Q	V	Y	A	I	R	Q	A
Template Known Secondary structure								B		S	S									S	S	S						T	T							S	T	.	T		T	T		G	G	G						T	S	S		T	T	T	T									S	S
Template Predicted Secondary structure																																						.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.						.	.	.	.	.	100	.							.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure														.	.	.	.	.								.	.	.	.	.	.
Query SS confidence														.	.	.	.	.								.	.	.	.	.	.
Query Sequence		I	T	R	A	L	M	E	Y	D	E	S	L	.	.	.	.	.	R	S	E	L	R	K	A	.	.	.	.	.	.	G	F	V	T	R	D	A	R	Q	V	E	R	K	K	V	G	L	R	K	A	R	R	R	P	Q	F	S	K	R
Query Conservation														.	.	.	.	.								.	.	.	.	.	.
Alig confidence														.	.	.	.	.								.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	K	G	L	V	A	Y	H	Q	K	Y	V	D	E	Q	S	K	N	E	L	K	K	A	F	T	S	Y	D	R	T	L	L	I	A	D	S	R	R	P	E	P	K	K	F	G	G	K	G	A	R	S	R	F	Q	K	S	Y	R
Template Known Secondary structure											T	T	T	S		T	T	T	S	S	S	S	S			S	S	S		S	S		T	T	S											T	T	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions