Job Description P77409 Confidence 97.63% Date Thu Jan 5 12:28:59 GMT 2012 Rank 5 Aligned Residues 155 % Identity 14% Template d1q90b_ SCOP info Heme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Resolution 3.10

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		S	N	A	L	L	F	V	L	L	L	A	S	G	L	I	N	H	F	A	M	V	G	A	T	A	V	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	A	V	H	E	V	C	G	F	L	L	L	A	C	W	L	G	F	V	L	I	N	A	V	G	D	N	G	H	H	Y	R	.	.	I	R
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		I	T	F	T	C	F	L	V	Q	V	A	T	G	F	A	M	T	F	Y	Y	R	P	T	V	A	E	A	F	A	S	V	Q	Y	I	M	T	D	V	N	F	G	W	L	I	R	S	I	H	R	W	S	A	S	M	M	V	L	M	M	V	L	H	V	F	R	V	Y	L	T	G	G	F	K	R	P	R	E	L	T	W
Template Known Secondary structure																		T	T	T				S	T	T	T											T	S	T	T																												T	T	T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		R	Q	G	W	L	E	R	A	A	K	Q	T	R	F	Y	L	F	G	I	M	Q	G	E	E	H	P	F	P	A	T	T	Q	S	K	F	N	P	L	Q	Q	V	A	Y	V	G	V	M	Y	G	L	L	P	L	L	L	L	.	.	.	T	G	L	L	C	L	Y	P	Q	A	V	G	D	V	F	P	G	V	R	Y	W
Query Conservation																																																										.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	G	V	I	M	A	V	C	T	V	S	F	G	V	T	G	Y	S	L	P	W	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	G	Y	W	A	V	K	I	V	T	G	V	P	D	A	I	P	G	V	G	G	F	I	V	E	L	L	R	G	G	V	G	V	G	Q	A	T	L	T	R
Template Known Secondary structure																					T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													G	G	G	G	S	T	T											T	S	S	S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		219	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		L	L	Q	T	H	.	F	A	L	A	F	I	S	L	F	F	I	F	G	H	L	Y	L	C	T	T	G	R	T	P	H	E
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		F	Y	S	L	H	T	F	V	L	P	L	L	T	A	V	F	M	L	M	H	F	L	M	I	R	K	Q	G	I	S	G	P
Template Known Secondary structure								T																						S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions