Job Description P77409 Confidence 97.80% Date Thu Jan 5 12:28:59 GMT 2012 Rank 3 Aligned Residues 147 % Identity 15% Template d1ppjc2 SCOP info Heme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Resolution 2.10

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	A	L	L	F	V	L	L	L	A	S	G	L	I	N	H	F	A	M	V	G	A	T	A	V	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	A	V	H	E	V	C	G	F	L	L	L	A	C	W	L	G	F	V	L	I	N	A	V	G	D	N	G	H	H	Y	R	I	R	R	Q
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	G	I	C	L	I	L	Q	I	L	T	G	L	F	L	A	M	H	Y	T	S	D	T	T	T	A	F	S	S	V	T	H	I	C	R	D	V	N	Y	G	W	I	I	R	Y	M	H	A	N	G	A	S	M	F	F	I	C	L	Y	M	H	V	G	R	G	L	Y	Y	G	S	Y	T	F	L	E	T	W	N	I
Template Known Secondary structure																			T	T					T	T	T												S	T	T																														T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		G	W	L	E	R	A	A	K	Q	T	R	F	Y	L	F	G	I	M	Q	G	E	E	H	P	F	P	A	T	T	Q	S	K	F	N	P	L	Q	Q	V	A	Y	V	G	V	M	Y	G	L	L	P	L	L	L	L	.	.	.	T	G	L	L	C	L	Y	P	Q	A	V	G	D	V	F	P	G	V	R	Y	W	L	L
Query Conservation																																																								.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	I	L	L	L	T	V	M	A	T	A	F	M	G	Y	V	L	P	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	M	S	F	W	G	A	T	V	I	T	N	L	L	S	A	I	P	Y	I	G	T	N	L	V	E	W	I	W	G	G	F	S	V	D	K	A	T	L	T	R	F	F
Template Known Secondary structure																			T	T		B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												G	G	G	G	G	S	T	T	T										T	S	S	S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	H	F	A	L	A	F	I	S	L	F	F	I	F	G	H	L	Y	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	H	F	I	L	P	F	I	I	M	A	I	A	M	V	H	L	L	F	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions