Job Description P77409 Confidence 100.00% Date Thu Jan 5 12:28:59 GMT 2012 Rank 1 Aligned Residues 183 % Identity 17% Template d1kqfc_ SCOP info Heme-binding four-helical bundle Transmembrane di-heme cytochromes Formate dehydrogenase N, cytochrome (gamma) subunit Resolution 1.60

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		D	H	G	E	K	I	Y	L	Y	S	K	A	V	R	L	W	H	W	S	N	A	L	L	F	V	L	L	L	A	S	G	L	I	N	H	F	A	M	V	G	.	.	.	.	.	A	T	A	V	K	S	L	V	A	V	H	E	V	C	G	F	L	L	L	A	C	W	L	G	F	V	L	I	N	A	V	G	D	N	G
Query Conservation																																										.	.	.	.	.
Alig confidence																																										.	.	.	.	.
Template Conservation
Template Sequence		S	K	S	K	M	I	V	R	T	K	F	I	D	R	A	C	H	W	T	V	V	I	C	F	F	L	V	A	L	S	G	I	S	F	F	F	P	T	L	Q	W	L	T	Q	T	F	G	T	P	Q	M	G	R	I	L	H	P	F	F	G	I	A	I	F	V	A	L	M	F	M	F	V	R	F	V	H	H	N	I	P
Template Known Secondary structure				S	S					S																												T	T		G	G	G	G	G	T	T	S	S																											G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	Y	R	I	R	R	Q	G	W	L	E	R	A	A	K	Q	T	R	F	Y	L	F	G	I	M	Q	G	E	E	H	P	F	P	A	T	T	Q	S	K	F	N	P	L	Q	Q	V	A	Y	V	G	V	M	Y	G	L	L	P	L	L	L	L	T	G	L	L	C	L	Y	P	Q	A	V	G	D	V	F	P	G	V
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template Sequence		D	K	K	D	I	P	W	L	L	N	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	L	K	G	N	E	H	K	V	A	D	V	G	K	Y	N	A	G	Q	K	M	M	F	W	S	I	M	S	M	I	F	.	V	L	L	V	T	G	V	I	I	W	R	P	Y	F	A	Q	Y	F	P	M	Q	V
Template Known Secondary structure			G	G	G						S			.	.	.	.	.	.	.	.	.	.	.	.	.				T	T										S	S																	.									T		T	T	T	T	G	G	G	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.														.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	W	L	L	Q	T	H	F	A	L	A	F	I	S	L	F	F	I	F	G	H	L	Y	L	C	T	T	G	R	T	P	H	E	T	F	K	S	M	V	D	G	Y	H	R
Query Conservation
Alig confidence																																.	.	.
Template Conservation																																.	.	.
Template Sequence		V	R	Y	S	L	L	I	H	A	A	A	G	I	I	L	I	H	A	I	L	I	H	M	Y	M	A	F	W	V	K	.	.	.	G	S	I	K	G	M	I	E	G	K	V	S
Template Known Secondary structure																														S	T	.	.	.	T							T
Template Predicted Secondary structure																																.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions