Job Description P77409 Confidence 97.55% Date Thu Jan 5 12:28:59 GMT 2012 Rank 7 Aligned Residues 146 % Identity 12% Template c3cx5N_ PDB info PDB header:oxidoreductase Chain: N: PDB Molecule:cytochrome b; PDBTitle: structure of complex iii with bound cytochrome c in reduced2 state and definition of a minimal core interface for3 electron transfer. Resolution 1.90 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		S	N	A	L	L	F	V	L	L	L	A	S	G	L	I	N	H	F	A	M	V	G	A	T	A	V	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	A	V	H	E	V	C	G	F	L	L	L	A	C	W	L	G	F	V	L	I	N	A	V	G	D	N	G	H	H	Y	R	.	.	I	R
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		L	L	G	L	C	L	V	I	Q	I	V	T	G	I	F	M	A	M	H	Y	S	S	N	I	E	L	A	F	S	S	V	E	H	I	M	R	D	V	H	N	G	Y	I	L	R	Y	L	H	A	N	G	A	S	F	F	F	M	V	M	F	M	H	M	A	K	G	L	Y	Y	G	S	Y	R	S	P	R	V	T	L	W
Template Known Secondary structure																			T	T				S	T	T	T											T	S	T	T																													T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		R	Q	G	W	L	E	R	A	A	K	Q	T	R	F	Y	L	F	G	I	M	Q	G	E	E	H	P	F	P	A	T	T	Q	S	K	F	N	P	L	Q	Q	V	A	Y	V	G	V	M	Y	G	L	L	P	L	L	.	.	.	L	L	T	G	L	L	C	L	Y	P	Q	A	V	G	D	V	F	P	G	V	R	Y	W
Query Conservation																																																								.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	G	V	I	I	F	I	L	T	I	A	T	A	F	L	G	Y	C	C	V	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	M	S	H	W	G	A	T	V	I	T	N	L	F	S	A	I	P	F	V	G	N	D	I	V	S	W	L	W	G	G	F	S	V	S	N	P	T	I	Q	R
Template Known Secondary structure																								B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													G	G	G	G	S	T	T	T										T	S	S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	T	H	F	A	L	A	F	I	S	L	F	F	I	F	G	H	L	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	A	L	H	Y	L	V	P	F	I	I	A	A	M	V	I	M	H	L	M	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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