Job Description P0AGM9 Confidence 2.60% Date Thu Jan 5 11:29:35 GMT 2012 Rank 39 Aligned Residues 251 % Identity 12% Template c3orgB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cmclc; PDBTitle: crystal structure of a eukaryotic clc transporter Resolution 3.50 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	R	I	I	T	P	L	V	S	G	V	V	V	M	I	I	G	L	S	L	I	Q	V	G	L	T	S	I	G	G	G	Y	A	A	M	S	D	N	T	F	G	A	P	K	N	L	L	L	A	G	V	V	L	A	L	I	I	L	L	N	R	Q	R	N	P	Y	L	R	V	A	S	L	V	I	A	M	A	A
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	L	R	L	V	C	F	L	T	L	L	G	V	T	A	A	L	F	I	F	A	V	D	L	A	V	H	G	L	E	E	L	R	M	K	I	S	R	L	A	G	R	F	A	G	Y	I	L	Y	V	V	S	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	C	L	L	S
Template Known Secondary structure																																										S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																				.	.	.	.	150	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.												.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	A	L	A	W	F	M	G	M	L	P	E	S	N	E	P	M	T	Q	E	L	I	M	V	P	T	P	L	Y	Y	G	L	G	I	E	W	S	L	L	L	P	L	M	L	V	F	M	I	T	.	.	.	.	.	.	.	.	.	.	.	S	L	E	T	I	G	D	I	T	A	T	S	D	V	S	E	Q	P	V
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.
Template Sequence		T	F	W	C	A	V	L	S	T	E	A	E	G	S	G	L	P	Q	M	K	S	I	L	S	G	F	Y	D	K	M	R	S	A	.	L	E	L	R	V	L	F	A	K	A	L	G	L	I	C	A	I	G	G	G	L	P	V	G	W	E	G	P	N	V	H	I	A	C	I	I	A	H	Q	F	Y	R	L	G	V	F
Template Known Secondary structure								S		G	G	G		B		S									T	T	T					G	G	G	.	G	S																	T	T		S		B	S																T	T	S	T	T	T
Template Predicted Secondary structure																																			.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		S	G	P	L	Y	M	K	R	L	K	G	G	V	L	A	N	G	L	N	S	F	V	S	A	V	F	N	T	F	P	N	S	C	F	G	Q	N	N	G	V	I	Q	L	T	G	V	A	S	R	Y	V	G	F	V	V	A	L	M	.	L	I	V	L	G	L	F	P	A	V	S	G	F	V	Q	H	I	P	E	P	V
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		K	E	L	C	T	D	R	A	L	R	L	Q	T	L	A	A	A	C	A	V	G	L	A	S	S	F	G	A	P	L	G	G	V	L	Y	S	I	E	T	I	A	S	F	Y	L	V	Q	A	F	W	K	G	V	L	S	A	L	S	G	A	I	V	Y	E	L	D	V	S	R	T	Q	T	L	L	Y	A	I	L	G	A
Template Known Secondary structure		T					S																					T													T		S	S			T	T																T	T						S		T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	A	T	L	V	M	F	G	T	I	A	A	S	G	V	R	I	V	S	R	E	P	L	N	R	R	A	I	L	I	I	A	L	S	L	A	V	G	L	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	G	V	L	G	A	L	F	I	R	C	V	R	S	I	Y	E	L	R	M	R	H	Y	P	G	T	N	R	Y	F	L	V	G	V	V	A	L	F	A	S	A	L
Template Known Secondary structure																							S	S	S	T	T			T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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