 |
Job Description | P0AGM9 | Confidence | 2.19% | Date | Thu Jan 5 11:29:35 GMT 2012 |
Rank | 55 | Aligned Residues | 27 |
% Identity | 26% | Template | c2qcnA_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:uridine 5'-monophosphate synthase; |
PDBTitle: covalent complex of the orotidine-5'-monophosphate decarboxylase2 domain of human ump synthase with 6-iodo-ump
|
Resolution | 1.85 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | |
|
|
10 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | V | S | T | L | E | S | E | . |
. |
. |
N | A | Q | P | V | . |
. |
. |
. |
. |
. |
. |
A | Q | T | Q | N | S | E | L | I | Y | R | L | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|
|
|
|
|
|
Template Sequence |   |
M | E | L | S | F | G | A | R | A | E | L | P | R | I | H | P | V | A | S | K | L | L | R | L | M | Q | K | K | E | T | N | L | C | L | S | A | D |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  | T | T |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
223 | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|