|   |
33 | . | . | . | . | . | . | 40 | |
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
|  |  |  |  |
|
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
V | L | E | L | T | P | L | T | . |
. |
. |
P | P | Q | G | A | L | V | I | S | A | G | I | H | G | N | E | T | A | P | V | E | M | L | D | A | L | L | G | A | I | S | H | G | E | . |
. |
. |
. |
. |
I | P | L | R | W | R | L | L | V | I | L | G | N | P | P | A | L | K | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|   |   |   |   |
|   |   | . | . | . |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
Y | I | K | I | S | T | T | N | F | E | D | E | N | K | P | V | I | F | I | D | G | G | I | H | A | R | E | W | I | S | P | P | S | V | T | W | A | I | H | K | L | V | E | D | V | T | E | N | D | L | L | E | K | F | D | W | I | L | L | P | V | V | N | P | D | G | Y | K | Y | T | F | T | N | E | R | F | W | R | K | T |
Template Known Secondary structure |   |
 |  |  |  |
| T | T | T | T |
|
| T | T | S |
|  |  |  |  |  |  |
| S | S | T | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
| T |  |  |  |  |  |
|  |  |  |  |  | S |
| S |
|  |  |  |  |  |  |  |  |  | T |
| T | T |
|
| S |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
G | K | R | Y | C | H | S | D | M | N | R | M | F | G | G | R | W | Q | L | F | A | E | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | E | T | C | R | A | R | E | L | E | Q | C | L | E | D | F | Y | D | Q | G | K | E | S | V | R | W | H | L | D | L | H | T | A |
Query Conservation |   |
. | . | . | . | . | . | . | . |   |   |
|   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |   |
|
|
|
| . | . | . | . | . | . | . |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |
Template Sequence |   |
R | S | T | N | N | N | P | L | S | Q | I | C | R | G | A | D | G | N | R | N | F | D | F | V | W | N | S | I | G | T | S | N | S | P | C | S | D | I | Y | A | G | T | S | A | F | S | E | V | E | . |
. |
. |
. |
. |
. |
. |
T | R | V | V | R | D | I | L | H | E | H | L | A | R | M | A | L | Y | L | T | M | H | S | F |
Template Known Secondary structure |   |
|
|
|
| S | S | G | G | G | G | T | S |
|
|
|
| G | G | G |
| S | S | S | S | T | T | S | S | S |
| B | S |
| T | T | S | T | T | B |
|
| S | S | T | T |
| S |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
  |
  |   |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
|
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
| . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | R | G | S | L | H | P | Q | F | G | V | L | P | Q | . |
. |
. |
R | D | I | P | W | D | E | K | F | L | T | W | L | G | A | A | G | L | E | A | L | V | F | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | E | P | G | G | T | F | T | H | F | S | A | R | H | F | G | A | L | A | C | T |
Query Conservation |   |
  |   |   |
|   |   |   |   |
|
|   |   |
|   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
G | S | M | I | L | Y | P | W | G | H | D | G | S | L | S | Q | N | A | L | G | L | H | T | V | G | V | A | M | A | S | V | I | Q | S | N | A | L | P | N | F | P | P | Y | T | V | G | N | S | A | L | V | I | G | Y | Y | I | A | G | S | S | E | D | Y | A | H | S | I | G | V | P | L | S | Y | T |
Template Known Secondary structure |   |
. | . | . | . | . | . | S | S |  |  |  |  | S |
| T | T | T |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T | S |
|
|
|  |  |  |  |  |  |  |  |  | S | S |
|
| S | S |
|  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
  |
  |   |
209 | 210 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
L | E | L | G |
Query Conservation |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |
|
|   |
Template Sequence |   |
Y | E | L | P |
Template Known Secondary structure |   |
 |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
Template SS confidence |   |
|
|
|
|
  |   |
269 | 270 | . | . |
  |