Job Description P76215 Confidence 3.56% Date Thu Jan 5 12:20:39 GMT 2012 Rank 81 Aligned Residues 45 % Identity 20% Template c3trkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nonstructural polyprotein; PDBTitle: structure of the chikungunya virus nsp2 protease Resolution 2.40 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	K	R	Y	C	H	S	D	M	N	R	M	F	G	G	R	W	Q	L	F	A	E	S	G	E	T	C	R	A	R	E	L	E	Q	C	L	E	D	F	Y	D	Q	G	K	E	S	V	R	W	H	L	D	L	H	T	A	I
Query Conservation
Alig confidence																												.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.													.	.	.	.	.	.	.	.	.
Template Sequence		A	G	I	K	L	N	D	R	Q	W	S	Q	I	I	Q	A	F	K	E	D	K	A	Y	S	P	E	.	.	.	.	V	A	L	N	E	I	C	T	R	X	Y	G	.	.	.	.	.	.	.	.	.	V	D	L	D	S	G	L
Template Known Secondary structure		T	T																	T	T							.	.	.	.												S	.	.	.	.	.	.	.	.	.	S		G	G	G		T
Template Predicted Secondary structure																												.	.	.	.													.	.	.	.	.	.	.	.	.
Template SS confidence
		1025	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050					.	.	.	.	.	.	.	.	.	1060	.	.										.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions