 |
Job Description | P76215 | Confidence | 3.05% | Date | Thu Jan 5 12:20:39 GMT 2012 |
Rank | 87 | Aligned Residues | 19 |
% Identity | 21% | Template | c3phzA_ |
PDB info |
PDB header:sugar binding protein | Chain: A: PDB Molecule:ricin b-related lectin; |
PDBTitle: crystal structure analysis of polyporus squamosus lectin bound to2 human-type influenza-binding epitope neu5aca2-6galb1-4glcnac
|
Resolution | 1.70 Å |
|
  |   |
296 | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | |
|
|
|
|
. | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
H | D | V | E | Y | V | L | F | P | N | P | L | V | A | L | . |
. |
. |
. |
. |
G | L | R | A |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|
|   |   |
|   |   | . | . | . | . | . |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
S | D | G | L | Y | L | V | L | T | R | D | Q | I | S | S | I | W | Q | A | S | G | L | G | S |
Template Known Secondary structure |   |
S | S |
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | G | G | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|