Job Description P76215 Confidence 99.42% Date Thu Jan 5 12:20:39 GMT 2012 Rank 19 Aligned Residues 184 % Identity 20% Template c3mn8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:lp15968p; PDBTitle: structure of drosophila melanogaster carboxypeptidase d isoform 1b2 short Resolution 2.70 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.										.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.													.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	P	P	Q	G	A	L	V	I	S	A	G	I	H	G	N	E	T	A	P	V	E	M	L	D	A	L	L	G	A	I	S	H	G	.	.	.	.	.	.	.	.	.	E	I	P	L	R	W	R	L	L	V	I	L	G	N	P	P	A	L	K	Q	G	K	.	.	.	.	.	.	.	.	.	.	.	.	R	Y
Query Conservation																																					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	N	L	L	T	P	P	V	K	Y	I	A	N	M	H	G	D	E	T	V	G	R	Q	L	L	V	Y	M	A	Q	Y	L	L	G	N	H	E	R	I	S	D	L	G	Q	L	V	N	S	T	D	I	Y	L	V	P	T	M	N	P	D	G	Y	A	L	S	Q	E	G	N	C	E	S	L	P	N	Y	V	G	R	G
Template Known Secondary structure				T	T										S	S	T	T																			T	T	T																	S		S							T	S		T	T		S	S			G	G	G	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		98	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure				.	.																																																																				.	.	.	.	.	.	.	.	.
Query SS confidence				.	.																																																																				.	.	.	.	.	.	.	.	.
Query Sequence		C	H	.	.	S	D	M	N	R	M	F	G	G	R	W	Q	L	F	A	E	S	G	E	T	C	R	A	R	E	L	E	Q	C	L	E	D	F	Y	D	Q	G	K	E	S	V	R	W	H	L	D	L	H	T	A	I	R	G	S	L	H	P	Q	F	G	V	L	P	Q	R	D	I	.	.	.	.	.	.	.	.	.
Query Conservation				.	.																																																																				.	.	.	.	.	.	.	.	.
Alig confidence				.	.																															.	.	.	.	.	.	.	.	.												.	.	.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template Sequence		N	A	A	N	I	D	L	N	R	D	F	P	D	R	L	E	A	Q	S	R	Q	P	E	T	A	A	L	V	N	W	I	V	S	K	.	.	.	.	.	.	.	.	.	P	F	V	L	S	A	N	F	H	G	G	.	.	.	.	.	.	A	V	V	A	S	Y	P	Y	D	N	S	L	A	H	N	E	C	C	E	E
Template Known Secondary structure			T	T				G	G	G		S			T	T					S												T	T	S	.	.	.	.	.	.	.	.	.											S	.	.	.	.	.	.	S						S		S			S	S			S	B	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.												.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200										.	.	.	.	.	.	.	.	.	210	.							.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
					167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	P	W	D	E	K	F	L	T	W	L	G	A	A	G	L	E	A	L	V	F	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	P	G	G	T	F	T	H	F	S	A	R	H	F	G	A	L	A	C	T	L	E	L	G	K	A	L	P	F	G	Q	N	D	L	R	Q
Query Conservation		.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	T	P	D	D	R	V	F	K	Q	L	A	H	T	Y	S	D	N	H	P	I	M	R	K	G	N	N	C	N	D	S	F	S	G	G	I	T	N	G	A	H	W	Y	E	L	S	G	G	M	Q	D	F	N	Y	A	F	S	N	C	F	E	L	T	I	E	L	S	C	C	K	Y	P	A	A	S	T	L	P	Q
Template Known Secondary structure					T	T														T	S	T	T	T	T	T	S		G	G	G				G	G	G								B			S	S										S	S										S	S	S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		225		.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		F	.	A	V	T	A	S	A	I	A	A	L	L	S
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		E	W	Q	R	N	K	A	S	L	L	Q	L	L	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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