Job Description P76215 Confidence 2.84% Date Thu Jan 5 12:20:39 GMT 2012 Rank 92 Aligned Residues 156 % Identity 16% Template c3lpnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of the phosphoribosylpyrophosphate (prpp) synthetase2 from thermoplasma volcanium in complex with an atp analog (ampcpp). Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	R	W	R	W	L	G	D	G	V	L	E	L	T	P	L	T	P	.	P	Q	G	A	L	V	I	S	A	G	I	H	G	N	E	T	A	P	V	E	M	L	D	A	L	L	G	A	I	S	H	G	E	I	P	L	R	W	R	L	L	V	I	L	G	N	P	P	A	L	K	Q	G	K	R	Y	C	H	S	D	M
Query Conservation																				.
Alig confidence																				.																.	.	.	.	.																																									.
Template Conservation																																				.	.	.	.	.																																									.
Template Sequence		P	D	E	R	R	F	P	D	G	E	L	Y	L	R	Y	D	E	D	L	T	G	H	N	I	F	I	I	G	N	T	H	S	D	A	.	.	.	.	.	E	V	M	E	M	I	L	T	L	S	A	I	Q	D	Y	R	T	K	S	V	N	I	I	A	P	Y	Y	G	Y	A	R	Q	H	Q	R	Y	K	N	G	E	.
Template Known Secondary structure								T	T	S								S			T	T	S										S			.	.	.	.	.												G	G	G	S			S							S	S		T	T	T	T			S		S	S	T	T		.
Template Predicted Secondary structure																																				.	.	.	.	.																																									.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	M	F	G	G	R	W	Q	L	F	A	E	S	G	E	T	C	R	A	R	E	L	E	Q	C	L	E	D	F	Y	D	Q	G	K	E	S	V	R	W	H	L	D	L	H	T	A	I	R	G	S	L	H	P	Q	F	G	V	L	P	Q	R	D	I	P	W	D	E	K	F	L	T	W	L	G	A	A	G	L	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.																.								.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.																.								.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	P	I	S	.	.	.	.	.	.	.	.	.	S	Q	I	L	T	E	I	Y	S	S	Y	S	N	S	I	.	A	T	V	D	I	H	D	.	.	.	.	E	K	T	L	S	Y	S	K	V	K	F	S	D	L	H	A	N	D	A	I	V	R	Y	Y	K	N	V	D	V	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.											T		S			.				S		S	S	.	.	.	.	G	G	G	G	G	G		S	S																T	T	S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.																.								.	.	.	.
Template SS confidence
													101	.	.										.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	F	H	Q	E	P	G	G	T	F	T	H	F	S	A	R	H	F	G	A	L	A	C	T	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	V	S	P	D	D	G	G	L	A	R	V	A	D	I	S	A	K	L	G	K	K	H	F	F	I	E
Template Known Secondary structure						S	S	S	S	S												T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions