Job Description P76215 Confidence 99.37% Date Thu Jan 5 12:20:39 GMT 2012 Rank 24 Aligned Residues 193 % Identity 17% Template c3l2nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase m14, carboxypeptidase a; PDBTitle: crystal structure of putative carboxypeptidase a (yp_562911.1) from2 shewanella denitrificans os-217 at 2.39 a resolution Resolution 2.39 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.																				.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.																				.	.	.
Query Sequence		V	L	E	L	T	P	L	T	P	P	Q	G	A	L	V	I	S	A	G	I	H	G	N	E	T	A	P	V	E	M	L	D	A	L	L	G	A	I	S	H	G	E	I	P	L	R	W	R	.	.	.	.	.	.	.	L	L	V	I	L	G	N	P	P	A	L	K	Q	G	K	R	Y	C	H	.	.	.	S	D	M
Query Conservation																																																		.	.	.	.	.	.	.																				.	.	.
Alig confidence																																																		.	.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		L	V	K	V	G	D	D	D	P	S	K	K	S	I	W	I	T	A	R	Q	H	P	G	E	T	X	A	E	W	L	V	E	G	L	L	N	Q	L	L	D	N	D	C	P	T	S	K	A	L	L	D	K	A	N	F	Y	I	V	P	N	X	N	P	D	G	S	V	R	G	H	L	R	T	N	A	V	G	A	N	L
Template Known Secondary structure						S				T	T	S									S	S	T	T		T														T		T	T	S																S		S							T	T		S	S			T	T	S			G
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	M	F	G	G	R	W	Q	L	F	A	E	S	G	E	T	C	R	A	R	E	L	E	Q	C	L	E	D	F	Y	D	Q	G	K	E	S	V	R	W	H	L	D	L	H	T	A	I	R	G	S	L	H	P	Q	F	G	V	L	P	Q	R	D	I	P	W	D	E	K	F	L	T	W	L	G	A	A	G	L	E
Query Conservation
Alig confidence								.	.	.	.	.																			.	.	.	.	.	.													.	.
Template Conservation								.	.	.	.	.																			.	.	.	.	.	.													.	.
Template Sequence		N	R	E	W	Q	T	.	.	.	.	.	P	S	L	E	R	S	P	E	V	Y	Y	V	V	N	K	X	H	E	.	.	.	.	.	.	T	G	V	D	L	F	Y	D	V	H	G	D	.	.	E	G	L	P	Y	V	F	L	A	G	C	E	G	I	P	N	Y	S	D	K	L	A	S	L	Q	Q	D	F	V	A	A
Template Known Secondary structure		G	G		S	S	S	.	.	.	.	.			T	T	T														.	.	.	.	.	.				S									.	.	S	S		S	S	B						T	T	S	T	T
Template Predicted Secondary structure								.	.	.	.	.																			.	.	.	.	.	.													.	.
Template SS confidence
		226	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.							250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.																.	.	.	.	.	210	.	.							.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Query Sequence		A	L	V	F	H	Q	E	P	G	G	T	F	T	H	F	S	A	R	H	F	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	C	T	L	E	L	G	.	.	.	.	.	.	K	A	L	P	F	G	Q	N	D	L	R	Q	F	A	V	T	A	S	A	I	A	A	L	L	S	G
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	L	A	S	A	D	F	Q	T	E	F	G	Y	D	K	D	E	P	G	K	A	N	L	T	V	A	C	N	W	V	A	N	T	F	K	C	L	S	N	T	L	E	X	P	F	K	D	N	A	N	L	A	D	P	F	Q	G	W	S	P	E	R	S	V	Y	F	G	E	A	S	L	I	A	X	R	A
Template Known Secondary structure							T	T	B		S	S	S	S						T	T				T	T	S										T										S	S			G	G	G			T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions