Job Description P76215 Confidence 100.00% Date Thu Jan 5 12:20:39 GMT 2012 Rank 10 Aligned Residues 271 % Identity 21% Template c3fmcC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:putative succinylglutamate desuccinylase / aspartoacylase; PDBTitle: crystal structure of a putative succinylglutamate desuccinylase /2 aspartoacylase family protein (sama_0604) from shewanella amazonensis3 sb2b at 1.80 a resolution Resolution 1.80 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		G	V	R	W	R	W	L	G	D	G	V	L	E	L	T	P	L	T	P	P	Q	G	A	L	V	I	S	A	G	I	H	G	N	E	T	A	P	V	E	M	L	D	A	L	L	G	A	I	S	H	G	E	I	P	L	R	W	R	L	L	V	I	L	G	N	P	P	A	L	K	Q	G	K	R	Y	C	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence								.	.	.	.																																																.																			.	.	.	.
Template Conservation								.	.	.	.																																																.
Template Sequence		G	Q	P	L	S	L	.	.	.	.	P	V	Y	R	F	K	G	K	G	A	G	P	S	V	Y	I	Q	A	N	V	H	G	A	E	V	Q	G	N	A	V	I	Y	Q	L	X	K	L	L	E	H	Y	E	L	L	G	D	I	.	S	L	V	P	L	A	N	P	L	G	I	N	Q	K	S	G	E	F	T	L	G	R
Template Known Secondary structure		S						.	.	.	.								S	S	S										S	S	T	T		T														T	T	S		B	S	S			.				S	S							T		B	S	S	S	S	B			S
Template Predicted Secondary structure								.	.	.	.																																																.
Template SS confidence
		16	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
							99	100	.	.	.	.	.	.	.	.	.	110	.	.																																				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	H	S	D	M	N	R	M	F	G	G	R	W	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	E	S	G	E	T	C	R	A	R	E	L	E	Q	C	L	E	D	F	Y	D	Q	G	K	E
Query Conservation		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		F	D	P	I	T	G	V	N	W	N	R	E	Y	L	D	H	G	F	N	I	E	V	W	Y	Q	E	H	S	H	L	D	D	D	T	L	I	T	A	F	R	A	T	L	V	E	E	C	A	R	R	L	N	N	P	W	G	V	T	T	G	H	R	L	A	V	T	L	Q	S	X	A	H	R	.	.	.	.	.	.	.
Template Known Secondary structure		B		T	T	T			B	G	G	G							S										T	T	S																								T	T																		T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.																		.	.	.	.	.	.	200	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	R	W	H	L	D	L	H	T	A	I	R	G	S	L	H	P	Q	F	G	V	L	P	Q	R	D	I	P	W	D	E	K	F	L	T	W	L	G	A	A	G	L	E	A	L	V	F	H	Q	E	P	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	H	F	S	A	R	H
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																					.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		.	A	D	I	V	L	D	L	H	T	G	P	K	S	C	K	H	L	Y	C	P	.	.	.	.	.	.	.	.	.	.	E	Y	E	R	S	A	A	Q	Y	F	S	I	P	Y	T	L	L	I	P	N	S	F	G	G	A	X	D	E	A	A	F	V	P	W	W	T	L	A	E	V	A	S	S	H	G	R	E	L	G
Template Known Secondary structure		.		S									S										.	.	.	.	.	.	.	.	.	.	G	G	G	G	G	G	G	G	T	S	S		S							S				S	S																			T	T
Template Predicted Secondary structure		.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
			164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.											.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.
Query SS confidence																																										.	.	.	.	.
Query Sequence		F	G	A	L	A	C	T	L	E	L	G	K	A	L	P	F	G	Q	N	D	L	R	Q	F	A	V	T	A	S	A	I	A	A	L	L	S	G	E	S	V	.	.	.	.	.	G	I	V	R	T	P	P	L	R	Y	R	V	V	S	Q	I	T	R	H	S	P	S	F	E	M	H	M	A	S	D	T	L	N	F	M
Query Conservation																																										.	.	.	.	.
Alig confidence															.	.	.																									.	.	.	.	.																										.
Template Conservation															.	.	.																																																							.
Template Sequence		V	R	V	S	A	L	T	L	E	L	G	S	Q	.	.	.	E	R	I	D	L	D	D	A	L	E	D	A	E	G	I	L	A	Y	L	S	H	R	G	V	I	A	E	T	V	L	P	K	P	X	K	R	Y	G	C	F	L	K	N	Y	R	K	F	H	A	P	K	A	G	X	.	V	E	Y	L	G	K	V	G	V
Template Known Secondary structure														S	.	.	.	S																					T	T	S	B	S	S														G	G	G							S	S				.					S		T	T
Template Predicted Secondary structure															.	.	.																																																							.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		P	F	E	K	G	T	L	L	A	Q	D	G	E	.	E	R	F	T	V	T	H	D	V	E	Y	V	L	F	P	N	P	L	V	A	L	G	L	R	A	G	L	M	L	E	K
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		P	X	K	A	T	D	P	L	V	N	L	L	R	L	D	L	Y	G	T	G	E	E	L	T	V	L	R	L	P	E	D	G	V	P	I	L	H	F	A	S	A	S	V	H	Q
Template Known Secondary structure			B		T	T	S								G	G	G	T	T	S	G	G	G							S	S									S	S	S				T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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