Job Description P76215 Confidence 99.25% Date Thu Jan 5 12:20:39 GMT 2012 Rank 35 Aligned Residues 172 % Identity 22% Template c3dgvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:carboxypeptidase b2; PDBTitle: crystal structure of thrombin activatable fibrinolysis inhibitor2 (tafi) Resolution 2.50 Å

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		33	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.										.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure							.																																						.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query SS confidence							.																																						.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Query Sequence		V	L	E	L	T	.	P	L	T	P	P	Q	G	A	L	V	I	S	A	G	I	H	G	N	E	T	A	P	V	E	M	L	D	A	L	L	G	A	I	S	H	G	E	.	.	.	.	.	.	.	.	.	I	P	L	R	W	R	L	L	V	I	L	G	N	P	P	A	L	K	Q	.	.	.	.	.	.	.	.	.
Query Conservation							.																																						.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Alig confidence							.																																						.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	K	V	S	K	K	E	Q	R	A	K	N	A	M	W	I	D	C	G	I	H	A	R	E	W	I	S	P	A	F	C	L	W	F	V	G	S	V	T	Y	Y	Y	G	K	E	K	M	H	T	N	L	L	K	H	M	D	F	Y	I	M	P	V	V	N	V	D	G	Y	D	Y	T	W	K	K	D	R	M	W	R
Template Known Secondary structure										S	S											S	S	T	T		T																	T	T	T																	S		S											T		T	T
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
									94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	K	R	Y	C	H	S	D	M	N	R	M	F	G	G	R	W	Q	L	F	A	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	T	C	R	A	R	E	L	E	Q	C	L	E	D	F	Y	D	Q	G	K	E	S	V	R	W	H	L	D	L	H	T	A
Query Conservation		.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.
Template Sequence		K	N	R	S	L	H	E	K	N	A	C	V	G	T	D	L	N	R	N	F	A	S	K	H	W	C	G	E	G	A	S	S	S	S	C	S	E	I	Y	C	G	T	Y	P	E	S	E	P	E	.	.	.	.	.	.	.	V	K	A	V	A	D	F	L	R	R	N	I	K	H	I	K	A	Y	I	S	M	H	S	Y
Template Known Secondary structure		S						T	T		S	S					G	G	G		S			T	T	T	T		T	T	S	B	S	S	T	T	S	T	T	B			S	S	T	T		S			.	.	.	.	.	.	.											T	G	G	G										S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.								.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.												170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.											.	.							.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.											.	.							.	.	.	.	.	.
Query Sequence		I	R	G	S	L	H	P	Q	F	G	V	L	P	Q	R	D	I	P	W	D	.	.	.	.	.	.	.	.	.	.	.	E	K	F	L	T	W	L	G	A	A	.	.	G	L	E	A	L	V	.	.	.	.	.	.	F	H	Q	E	P	G	G	T	F	T	H	F	S	A	R	H	F	G	A	L	A	C	T	L	E
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.											.	.							.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.											.	.							.	.	.	.	.	.															.
Template Conservation		.	.	.	.	.	.																																																																.
Template Sequence		.	.	.	.	.	.	S	Q	K	I	V	F	P	Y	S	Y	S	R	S	R	S	K	D	H	E	E	L	S	L	V	A	R	E	A	V	F	A	M	E	N	I	H	R	N	I	R	Y	T	H	G	S	G	S	E	S	L	Y	L	A	P	G	G	S	D	D	W	I	Y	D	.	L	G	I	K	Y	S	F	T	F	E
Template Known Secondary structure		.	.	.	.	.	.	S	S					S		S	S		S	S			T	T																				T	T								G	G	G	S	S	S			T	T								T	.	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.																																																																.
Template SS confidence
								199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.
		211	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	K	A	L	P	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	D	K	G	K	Y	G
Template Known Secondary structure			S		S	S	S	S	T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions