Job Description P76215 Confidence 99.98% Date Thu Jan 5 12:20:39 GMT 2012 Rank 12 Aligned Residues 201 % Identity 19% Template c2qvpC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative metallopeptidase (sama_0725) from2 shewanella amazonensis sb2b at 2.00 a resolution Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		V	L	E	L	T	P	L	T	P	P	Q	G	A	L	V	I	S	A	G	I	H	G	N	E	T	A	P	V	E	M	L	D	A	L	L	G	A	I	S	H	G	E	I	P	L	R	W	R	L	L	V	I	L	G	N	P	P	A	L	K	Q	G	K	R	Y	.	.	C	H	S	D	M	N	R	M	F	G	G	R	W
Query Conservation																																																																			.	.
Alig confidence																																																																			.	.
Template Conservation
Template Sequence		L	L	Q	S	P	G	Q	K	A	G	L	P	N	L	L	I	S	A	G	F	H	G	E	E	S	A	G	P	W	G	L	L	H	F	L	S	Q	L	D	G	E	L	F	K	R	V	N	L	S	V	L	P	L	V	N	P	T	G	F	A	K	G	H	R	F	N	E	L	G	E	N	P	N	R	G	F	F	I	E	N
Template Known Secondary structure						S	S			T	T	S									S	S	T	T		T												T			S	G	G	G	G	S									S								T		S	S		T	T	S			T	T	S						T
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.														.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	L	F	A	E	S	G	E	T	C	R	A	R	E	L	E	Q	C	L	E	D	F	Y	D	Q	G	K	E	S	V	R	W	H	L	D	L	H	T	A	I	R	G	S	L	H	P	Q	F	G	V	L	P	Q	R	D	I	P	W	D	E	K	F	L	T	W	L	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.
Template Sequence		G	K	A	K	P	G	A	D	T	S	A	E	G	R	I	L	L	E	H	A	H	L	L	Q	V	A	S	.	.	R	D	G	I	L	T	C	H	E	D	V	L	X	T	D	T	Y	V	Y	T	F	E	P	S	Q	A	P	G	R	F	S	H	S	L	R	D	A	L	G	Q	Y	F	P	I	A	A	D	G	D	V	D
Template Known Secondary structure		T						T	T											T								T	.	.	T	T									T	T		S	S	B							S	S	S	S														T	T	S		B			S				T
Template Predicted Secondary structure																													.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	L	E	A	L	V	F	H	Q	E	P	G	G	T	F	T	H	F	S	A	R	H	F	G	A	L	A	C	T	L	E	L	G	K	A	L	P	F	G	Q	N	D	L	R	Q	F	A	V	T	A	S	A	I	A	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	C	P	V	R	S	G	V	I	F	N	H	F	D	T	S	F	E	S	F	L	V	R	S	G	A	R	V	G	C	C	S	E	T	P	G	Q	Q	P	L	D	Q	R	I	L	A	N	A	A	A	X	N	T	F	V	N	X	L
Template Known Secondary structure		T				B	T	T				S				S	S								T	T		S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions