 |
Job Description | P76215 | Confidence | 15.88% | Date | Thu Jan 5 12:20:39 GMT 2012 |
Rank | 54 | Aligned Residues | 63 |
% Identity | 16% | Template | c2hklB_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:l,d-transpeptidase; |
PDBTitle: crystal structure of enterococcus faecium l,d-2 transpeptidase c442s mutant
|
Resolution | 2.60 Å |
|
 |
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | P | Q | G | A | L | V | I | S | A | G | I | H | G | N | E | T | A | P | V | E | M | L | D | A | L | L | G | A | I | S | H | G | E | I | P | L | R | W | R | L | L | V | I | L | G | N | P | P | A | L | K | Q | G | K | R | Y | C | H | S | D | M |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|
|
Template Sequence |   |
S | T | K | R | G | E | V | T | V | P | V | G | T | Y | S | W | T | I | Q | T | D | S | E | T | E | A | L | K | K | A | I | L | A | G | Q | D | F | T | R | S | P | I | V | Q | G | G | T | T | A | D | H | P | L | I | E | D | T | Y | I | E | V | D | L |
Template Known Secondary structure |   |
| S | S | S |
|  |  |  |  |
|
|
| S | S |
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |
|
|
|  |  |  | S | S |
| S | S | S |
| S | S |
| S |
|  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
287 | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|