Job Description P76215 Confidence 99.32% Date Thu Jan 5 12:20:39 GMT 2012 Rank 32 Aligned Residues 194 % Identity 21% Template c2boaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:carboxypeptidase a4; PDBTitle: human procarboxypeptidase a4. Resolution 2.20 Å

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		33	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure														.																													.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.																													.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	E	L	T	P	L	T	P	P	Q	G	.	A	L	V	I	S	A	G	I	H	G	N	E	T	A	P	V	E	M	L	D	A	L	L	G	A	I	S	H	.	.	.	.	.	.	.	.	.	G	E	I	P	L	R	W	R	L	L	V	I	L	G	N	P	P	A	L	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.																													.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																													.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	K	F	S	T	G	K	G	V	R	R	P	A	V	W	L	N	A	G	I	H	S	R	E	W	I	S	Q	A	T	A	I	W	T	A	R	K	I	V	S	D	Y	Q	R	D	P	A	I	T	S	I	L	E	K	M	D	I	F	L	L	P	V	A	N	P	D	G	Y	V	Y	T	Q	T	Q	N	R	L	W	R
Template Known Secondary structure							S	S	T	T												S	S	T	T																			T	T	T	S																S		S											T		T	T
Template Predicted Secondary structure
Template SS confidence
		1049	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.
							92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.														.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	K	Q	G	K	R	Y	C	H	S	D	M	N	R	M	F	G	G	R	W	Q	L	F	A	E	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	T	C	R	A	R	E	L	E	Q	C	L	E	D	F	Y	D	Q	G	K	E	S	V	R	W	H	L	D	L	H	T	A	I	R	G	S
Query Conservation		.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.														.	.	.	.
Template Conservation																																																												.	.	.	.	.														.	.	.	.
Template Sequence		K	T	R	S	R	N	P	G	S	S	C	I	G	A	D	P	N	R	N	W	N	A	S	F	A	G	K	G	A	S	D	N	P	C	S	E	V	Y	H	G	P	H	A	N	S	E	V	E	V	K	S	V	V	D	F	I	Q	K	.	.	.	.	.	H	G	N	F	K	G	F	I	D	L	H	S	Y	.	.	.	.
Template Known Secondary structure		S				B		T	T		S		B				G	G	G		S	S	S	S	T	T	S	T	T		B	S		T	T	S	T	T	B			S	S	T	T		S													.	.	.	.	.													S	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.														.	.	.	.
Template SS confidence
		1128	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.						.	.	.	.	1190	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.															180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure												.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query SS confidence												.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Query Sequence		L	H	P	Q	F	G	V	L	P	Q	.	.	.	.	R	D	I	P	W	D	E	K	F	L	T	W	L	G	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	E	A	L	V	F	H	Q	E	P	G	G	T	F	T	H	F	S	A	R	H	F	G	A	L	A	C	T	L	E	L	.	.	.	.
Query Conservation												.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.
Alig confidence		.	.									.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.												.	.	.	.
Template Conservation		.	.																																																															.
Template Sequence		.	.	S	Q	L	L	M	Y	P	Y	G	Y	S	V	K	K	A	P	D	A	E	E	L	D	K	V	A	R	L	A	A	K	A	L	A	S	V	S	G	T	E	Y	Q	V	G	P	T	C	T	T	V	Y	P	A	S	G	S	S	I	D	W	A	Y	D	.	N	G	I	K	F	A	F	T	F	E	L	R	D	T	G
Template Known Secondary structure		.	.	S						S		S	S	S	S				T	T																																S				S	S									.	T	T		S								S		S	S
Template Predicted Secondary structure		.	.																																																															.
Template SS confidence
				1199	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260		.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.
				212	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.													.	.	.
Query SS confidence		.	.													.	.	.
Query Sequence		.	.	G	K	A	L	P	F	G	Q	N	D	L	R	.	.	.	Q	F	A	V	T	A	S	A	I	A	A	L	L	S	G
Query Conservation		.	.													.	.	.
Alig confidence		.	.													.	.	.
Template Conservation
Template Sequence		T	Y	G	F	L	L	P	A	N	Q	I	I	P	T	A	E	E	T	W	L	G	L	K	T	I	M	E	H	V	R	D	N
Template Known Secondary structure		S	S	T	T	S			G	G	G																						S
Template Predicted Secondary structure
Template SS confidence
		1276	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions