Job Description P76215 Confidence 99.37% Date Thu Jan 5 12:20:39 GMT 2012 Rank 25 Aligned Residues 192 % Identity 20% Template c1nsaA_ PDB info PDB header:serine protease Chain: A: PDB Molecule:procarboxypeptidase b; PDBTitle: three-dimensional structure of porcine procarboxypeptidase2 b: a structural basis of its inactivity Resolution 2.30 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.										.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	E	L	T	P	L	T	P	P	Q	G	A	L	V	I	S	A	G	I	H	G	N	E	T	A	P	V	E	M	L	D	A	L	L	G	A	I	S	H	G	.	.	.	.	.	.	.	.	.	E	I	P	L	R	W	R	L	L	V	I	L	G	N	P	P	A	L	K	Q	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	K	V	G	K	P	G	S	N	K	P	A	I	F	M	D	C	G	F	H	A	R	E	W	I	S	Q	A	F	C	Q	W	F	V	R	D	A	V	R	T	Y	G	Y	E	A	H	M	T	E	F	L	D	N	L	D	F	Y	V	L	P	V	L	N	I	D	G	Y	I	Y	T	W	T	K	N	R	M	W	R	K
Template Known Secondary structure						S				T	T										S	S	T	T																			T	T	T	S																S		S											T		T	T			S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
								94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	G	K	R	Y	C	H	S	D	M	N	R	M	F	G	G	R	W	Q	L	F	A	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	T	C	R	A	R	E	L	E	Q	C	L	E	D	F	Y	D	Q	G	K	E	S	V	R	W	H	L	D	L	H	T	A	I	R
Query Conservation		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.																									.	.
Template Conservation																																																	.	.	.	.	.	.	.																									.	.
Template Sequence		T	R	S	T	N	A	G	S	S	C	T	G	T	D	P	N	R	N	F	N	A	G	W	C	T	V	G	A	S	V	N	P	C	N	E	T	Y	C	G	S	A	A	E	S	E	K	E	.	.	.	.	.	.	.	T	K	A	L	A	D	F	I	R	N	N	L	S	S	I	K	A	Y	L	T	I	H	S	Y	.	.
Template Known Secondary structure					B		T	T	S	S		B				G	G	G	S	S	S	S	S	T	T	S	S	S		B	S		T	T	S	T	T	B			S	S	T	T		S			.	.	.	.	.	.	.											T	T	T	T										S	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.																									.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.								.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.													170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																											.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																											.	.
Query Sequence		G	S	L	H	P	Q	F	G	V	L	P	Q	R	D	I	P	W	D	.	.	.	.	.	.	.	.	.	.	.	.	E	K	F	L	T	W	L	G	A	A	G	L	E	A	L	V	.	.	.	.	.	.	F	H	Q	E	P	G	G	T	F	T	H	F	S	A	R	H	F	G	A	L	A	C	T	L	E	L	.	.
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																											.	.
Alig confidence		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.															.												.	.
Template Conservation		.	.	.	.																																																															.
Template Sequence		.	.	.	.	S	Q	M	I	L	Y	P	Y	S	Y	D	Y	K	L	P	E	N	D	A	E	L	N	S	L	A	K	G	A	V	K	E	L	A	S	L	Y	G	T	S	Y	S	Y	G	P	G	S	T	T	I	Y	P	A	A	G	G	S	D	D	W	A	Y	N	.	Q	G	I	K	Y	S	F	T	F	E	L	R	D
Template Known Secondary structure		.	.	.	.	S						S		S	S		S				T	T																																S														.	T	T		S								S
Template Predicted Secondary structure		.	.	.	.																																																															.
Template SS confidence
						199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.
						212	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.												.	.	.
Query SS confidence		.	.	.	.												.	.	.
Query Sequence		.	.	.	.	G	K	A	L	P	F	G	Q	N	D	L	.	.	.	R	Q	F	A	V	T	A	S	A	I	A	A	L	L	S	G
Query Conservation		.	.	.	.												.	.	.
Alig confidence		.	.	.	.												.	.	.
Template Conservation
Template Sequence		K	G	R	F	G	F	V	L	P	E	S	Q	I	Q	A	T	C	Q	E	T	M	L	A	V	K	Y	V	T	N	Y	T	L	E	H
Template Known Secondary structure		S	S	S	S	T	T				G	G	G																					T	T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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