 |
| Job Description | P76215 | | Confidence | 10.95% | Date | Thu Jan 5 12:20:39 GMT 2012 |
| Rank | 58 | Aligned Residues | 26 |
| % Identity | 23% | Template | c1no7A_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:major capsid protein; |
PDBTitle: structure of the large protease resistant upper domain of2 vp5, the major capsid protein of herpes simplex virus-1
|
| Resolution | 2.90 Å |
|
| | |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
| Predicted Secondary structure | |
 | | |  |
|
|
|
|
|
|
|
|  | | | | | | | | | | | | |
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
V | I | S | A | G | I | H | G | N | E | T | A | P | V | E | M | L | D | A | L | L | G | A | I | S | H |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
| | |
|
| | | | | |
| | | |
| | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
|
|
| |
|
| | | | | |
|
|
|
|
|
| |
|
| Template Sequence | |
L | L | Q | A | A | I | H | G | S | E | H | V | F | C | A | L | A | R | L | V | V | Q | C | I | T | S |
| Template Known Secondary structure | |
| | | | | S |
| S |
| | | | | | | T | | | | | | | | | | |
| Template Predicted Secondary structure | |
| | | | | |
|
|
| | | | | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
629 | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
