Job Description P76215 Confidence 99.36% Date Thu Jan 5 12:20:39 GMT 2012 Rank 27 Aligned Residues 174 % Identity 18% Template c1h8lA_ PDB info PDB header:carboxypeptidase Chain: A: PDB Molecule:carboxypeptidase gp180 residues 503-882; PDBTitle: duck carboxypeptidase d domain ii in complex with gemsa Resolution 2.6 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.										.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.										.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.					.
Query SS confidence																																				.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.					.
Query Sequence		L	T	P	P	Q	G	A	L	V	I	S	A	G	I	H	G	N	E	T	A	P	V	E	M	L	D	A	L	L	G	A	I	S	H	.	.	.	.	.	.	.	.	.	G	E	I	P	L	R	W	R	L	L	V	I	L	G	N	P	P	A	L	K	Q	G	K	.	.	.	.	.	.	.	.	.	R	Y	C	H	.
Query Conservation																																				.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.					.
Alig confidence																																				.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.					.
Template Conservation
Template Sequence		H	E	A	G	E	P	E	F	K	Y	I	G	N	M	H	G	N	E	V	V	G	R	E	L	L	L	N	L	I	E	Y	L	C	K	N	F	G	T	D	P	E	V	T	D	L	V	Q	S	T	R	I	H	I	M	P	S	M	N	P	D	G	Y	E	K	S	Q	E	G	D	R	G	G	T	V	G	R	N	N	S	N
Template Known Secondary structure				T	T										S	S	T	T																			T	T	T																	S		S							T			T	T		S	S			T	T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.											.	.	.	.	.
Predicted Secondary structure		.																																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	S	D	M	N	R	M	F	G	G	R	W	Q	L	F	A	E	S	G	E	T	C	R	A	R	E	L	E	Q	C	L	E	D	F	Y	D	Q	G	K	E	S	V	R	W	H	L	D	L	H	T	A	I	R	G	S	L	H	P	Q	F	G	V	L	P	Q	.	.	.	.	.	.	.	.	.	.	R	D	I	P	W
Query Conservation		.																																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																						.											.	.	.	.	.	.													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.
Template Conservation																								.											.	.	.	.	.	.													.	.	.	.	.	.
Template Sequence		N	Y	D	L	N	R	N	F	P	D	Q	F	F	Q	V	T	D	P	P	Q	P	E	.	T	L	A	V	M	S	W	L	K	T	.	.	.	.	.	.	Y	P	F	V	L	S	A	N	L	H	G	G	.	.	.	.	.	.	S	L	V	V	N	Y	P	F	D	D	D	E	Q	G	I	A	I	Y	S	K	S	P	D
Template Known Secondary structure		S			G	G	G		S			S	S	S				S						.											.	.	.	.	.	.	S											S	.	.	.	.	.	.							S		S			T	T		S	S	S					T	T
Template Predicted Secondary structure																								.											.	.	.	.	.	.													.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	K	F	L	T	W	L	G	A	A	G	L	E	A	L	V	F	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	P	G	G	T	F	T	H	F	S	A	R	H	F	G	A	L	A	C	T	L	E	L	G	K	A	L	P	F	G	Q	N	D	L	R	Q
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	V	F	Q	Q	L	A	L	S	Y	S	K	E	N	K	K	M	Y	Q	G	S	P	C	K	D	L	Y	P	T	E	Y	F	P	H	G	I	T	N	G	A	Q	W	Y	N	V	P	G	G	M	Q	D	W	N	Y	L	N	T	N	C	F	E	V	T	I	E	L	G	C	V	K	Y	P	K	A	E	E	L	P	K
Template Known Secondary structure														T	T	S					T	T		S		T	T	T	S	T	T				G	G	G												S										S	S										S		S	S			G	G	G
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		225
Predicted Secondary structure
Query SS confidence
Query Sequence		F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		287

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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