Job Description P76215 Confidence 99.26% Date Thu Jan 5 12:20:39 GMT 2012 Rank 34 Aligned Residues 173 % Identity 21% Template c1ayeA_ PDB info PDB header:serine protease Chain: A: PDB Molecule:procarboxypeptidase a2; PDBTitle: human procarboxypeptidase a2 Resolution 1.80 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.										.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	E	L	T	P	L	T	P	P	Q	G	A	L	V	I	S	A	G	I	H	G	N	E	T	A	P	V	E	M	L	D	A	L	L	G	A	I	S	H	G	.	.	.	.	.	.	.	.	.	E	I	P	L	R	W	R	L	L	V	I	L	G	N	P	P	A	L	K	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																																		.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		V	L	K	F	S	T	G	.	G	D	K	P	A	I	W	L	D	A	G	I	H	A	R	E	W	V	T	Q	A	T	A	L	W	T	A	N	K	I	V	S	D	Y	G	K	D	P	S	I	T	S	I	L	D	A	L	D	I	F	L	L	P	V	T	N	P	D	G	Y	V	F	S	Q	T	K	N	R	M	W	R	K
Template Known Secondary structure							S	S	.	S	S										S	S	T	T																			T	T	T	S																S		S											T		T	T			S
Template Predicted Secondary structure									.
Template SS confidence
		49	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
							93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.														.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	Q	G	K	R	Y	C	H	S	D	M	N	R	M	F	G	G	R	W	Q	L	F	A	E	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	T	C	R	A	R	E	L	E	Q	C	L	E	D	F	Y	D	Q	G	K	E	S	V	R	W	H	L	D	L	H	T	A	I	R	G	S	L
Query Conservation		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.														.	.	.	.	.
Template Conservation																																																											.	.	.	.	.														.	.	.	.	.
Template Sequence		T	R	S	K	V	S	G	S	L	C	V	G	V	D	P	N	R	N	W	D	A	G	F	G	G	P	G	A	S	S	N	P	C	S	D	S	Y	H	G	P	S	A	N	S	E	V	E	V	K	S	I	V	D	F	I	K	S	.	.	.	.	.	H	G	K	V	K	A	F	I	I	L	H	S	Y	.	.	.	.	.
Template Known Secondary structure					B		T	T		S		B				G	G	G		S	S	S	S	T	T	S	S	S	S	B			T	T	S	T	T	B			S	S	T	T		S													.	.	.	.	.													S	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.														.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.									180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Query SS confidence											.	.	.	.																	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Query Sequence		H	P	Q	F	G	V	L	P	Q	.	.	.	.	R	D	I	P	W	D	E	K	F	L	T	W	L	G	A	A	.	.	.	.	.	.	.	.	G	L	E	A	L	V	.	.	.	.	.	.	F	H	Q	E	P	G	G	T	F	T	H	F	S	A	R	H	F	G	A	L	A	C	T	L	E	L	G	K	A	L	P
Query Conservation											.	.	.	.																	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Alig confidence		.									.	.	.	.																	.	.	.	.	.	.	.	.							.	.	.	.	.	.															.
Template Conservation		.																																																															.
Template Sequence		.	S	Q	L	L	M	F	P	Y	G	Y	K	C	T	K	L	D	D	F	D	E	L	S	E	V	A	Q	K	A	A	Q	S	L	R	S	L	H	G	T	K	Y	K	V	G	P	I	C	S	V	I	Y	Q	A	S	G	G	S	I	D	W	S	Y	D	.	Y	G	I	K	Y	S	F	A	F	E	L	R	D	T	G	R
Template Known Secondary structure		.	S						S		S	S	S		S			T	T																																T				S	S									.	T	T		S								S		S	S	S
Template Predicted Secondary structure		.																																																															.
Template SS confidence
			199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		217	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G
Template Known Secondary structure		S	T
Template Predicted Secondary structure
Template SS confidence
		277	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions