Return to main results Retrieve Phyre Job Id

Job DescriptionP0AC86
Confidence100.00%DateThu Jan 5 11:17:35 GMT 2012
Rank1Aligned Residues797
% Identity50%Templatec3ddsB_
PDB info PDB header:transferaseChain: B: PDB Molecule:glycogen phosphorylase, liver form; PDBTitle: crystal structure of glycogen phosphorylase complexed with an2 anthranilimide based inhibitor gsk261
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 












Query SS confidence 















































































Query Sequence  SVEALKHSIAYKLMFTIGKDPVVANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSL
Query Conservation              
          
     
 

   


 
   
  
         
 




 


 

 
 
 
 

Alig confidence 















































































Template Conservation              
          
     
 


  


 
   
  
         
 




 


 

 
 
 
 

Template Sequence  NVAELKKSFNRHLHFTLVKDRNVATTRDYYFALAHTVRDHLVGRWIRTQQHYYDKCPKRVYYLSLEFYMGRTLQNTMINL
Template Known Secondary structure 
TS


GGG





S


Template Predicted Secondary structure 












Template SS confidence 















































































   23......30.........40.........50.........60.........70.........80.........90.........100..
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  GIYEDVQGALEAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGSQKESPDYW
Query Conservation 

      

  

  
      
 

 






 



 






 

  
 

 
  


 
 
 

 
 
  
 
Alig confidence 















































































Template Conservation 

      

  

  
      
 

 






 



 









  
 

 
  


 
 
 

 
 
    
Template Sequence  GLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDW
Template Known Secondary structure  T
TT

TTS



STT


SB
S
TT


T
Template Predicted Secondary structure 

































Template SS confidence 















































































   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   173......180.........190.........200.........210.........220.........230.........240.........250..
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  LEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQIIPGYDTDATNTLRLWSAQASSEINLGKFNQGDY
Query Conservation 
    


  
      
 
 
 
              
 

 

 

 

    
  



 
          

 

 
Alig confidence 






































































...





Template Conservation 
    


  
      
   
 
              
 

 

 

 

    
  



 
       ...
  

 
Template Sequence  LRYGNPWEKSRPEFMLPVHFYGKVEHTNTGTKWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPNDFN. . . LRDGDY
Template Known Secondary structure  TTT

TT

GGG
S
TTS

TTSS



S

...TT


Template Predicted Secondary structure 










































...





Template SS confidence 















































































   183......190.........200.........210.........220.........230.........240.........250... ......
 
   253......260.........270.........280.........290.........300..... ....310.........320.......
Predicted Secondary structure 













.....












Query SS confidence 




















































. . . . .





















Query Sequence  FAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSSTIQDILSRHYQLH. . . . . KTYDNLADKIAIHLNDTHPVLS
Query Conservation    
         

  


 
    





 





 


  
        .....  
        









 
Alig confidence 




















































.....





















Template Conservation    
         

  


 
    





 

  

 


  
 
                      




 



 
Template Sequence  IQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTGTVFDAFPDQVAIQLNDTHPALA
Template Known Secondary structure  TGGGSB



SS




SGGG



GGGGSSTTTT
Template Predicted Secondary structure 

































Template SS confidence 















































































   263......270.........280.........290.........300.........310.........320.........330.........340..
 
   328.330.........340.........350.........360.........370.........380.........390.........400.......
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  IPEMMRLLIDEHQFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLL
Query Conservation 
 



 
 
  

   

 


     











     
    


   

 


  
   
      
    
Alig confidence 















































































Template Conservation 
 



 
 
  

   

 


     











     
    


   

 


  
              
Template Sequence  IPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVLPEALERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALFPKDVDRL
Template Known Secondary structure  TS







GGG



TT
Template Predicted Secondary structure 





















Template SS confidence 















































































   346...350.........360.........370.........380.........390.........400.........410.........420.....
 
   408.410.........420.........430.........440.........450.........460.........470.........480.......
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  GRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFTNVTNGVTPRRWLAVANPSLSAVLDE
Query Conservation    
 

 
       

 


  
  




 

 

 
           
 

  





   

   

 
  
   
Alig confidence 















































































Template Conservation      

 
       

 


  
  




 

 

 
         
 
 

  




    

   

 
  
   
Template Sequence  RRMSLIEEEGSKRINMAHLCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELIAE
Template Known Secondary structure 
S
SSS
T
SSSTTT
GGG



B
T





T
Template Predicted Secondary structure 


























Template SS confidence 















































































   426...430.........440.........450.........460.........470.........480.........490.........500.....
 
   488.490.........500.........510.........520.........530.........540.........550.........560.......
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  HLGRNWRTDLSLLNELQQHCDFPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVIT
Query Conservation   

  
  
   
  
    

      
   
   
  
   
    
  
 
  


 




  



 



    
Alig confidence 















































































Template Conservation   

  
  
   
  
    

     

   
   
  
   
    
  


  


 




  



 



    
Template Sequence  KIGEDYVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKINPSSMFDVQVKRIHEYKRQLLNCLHVIT
Template Known Secondary structure 
SGGGT
GGGGGGGGGGTT





TTSS


TTTT
Template Predicted Secondary structure 


















Template SS confidence 















































































   506...510.........520.........530.........540.........550.........560.........570.........580.....
 
   568.570.........580.........590.........600.........610.........620.........630.........640.......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  RYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQ
Query Conservation 
   
  

     
 
 







 
  

 


 
  

  

 

 
   








 
 

  

 
 




Alig confidence 















































































Template Conservation 
   
  
      
 
 







 
  

 


 
  

  

 

 
   








 
 

  

 
 




Template Sequence  MYNRIKKDPKKLFVPRTVIIGGKAAPGYHMAKMIIKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQ
Template Known Secondary structure 
TTS







TT

TTTGGGTT

GGG
S
Template Predicted Secondary structure 

























Template SS confidence 















































































   586...590.........600.........610.........620.........630.........640.........650.........660.....
 
   648.650.........660.........670.........680.........690.........700.........710.........720.......
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  ISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLDHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQI
Query Conservation   
    









 


 
 










   

 

 
 

    

      

           
  
 
 
Alig confidence 















































































Template Conservation   
    








 



 











    

 

 
 

    

       
     
        
 
 
Template Sequence  ISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYEALPELKLVIDQI
Template Known Secondary structure 


TTS
S

STT

S
TT
GGGS
S




T
Template Predicted Secondary structure 





































Template SS confidence 















































































   666...670.........680.........690.........700.........710.........720.........730.........740.....
 
   728.730.........740.........750.........760.........770.........780.........790.........800.......
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  GSGVFSPEDPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDRTIKEYADHI
Query Conservation    
     
   
  

  
    
      

  
   
  
   
 
   
      


  
 






 


  
Alig confidence 




















.

























































Template Conservation    
     
   
  
   
 .  
 
 
  

 

   
  
   
 
   
      


  
 






 


  
Template Sequence  DNGFFSPKQPDLFKDIINMLF. YHDRFKVFADYEAYVKCQDKVSQLYMNPKAWNTMVLKNIAASGKFSSDRTIKEYAQNI
Template Known Secondary structure  TTT
TTSTTTT.

TT
T
T
GGGBT
Template Predicted Secondary structure 








.














Template SS confidence 















































































   746...750.........760...... ...770.........780.........790.........800.........810.........820....
 
   808.810...
Predicted Secondary structure 


Query SS confidence 





Query Sequence  WHIDPV
Query Conservation 
   
 
Alig confidence 





Template Conservation 
   
 
Template Sequence  WNVEPS
Template Known Secondary structure  T




Template Predicted Secondary structure 




Template SS confidence 





   825....830
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions