|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
|
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | Q | E | Q | T | M | L | N | V | A | D | N | S | G | A | R | R | V | M | C | I | K | V | L | G | G | S | H | R | R | . |
. |
. |
. |
Y | A | G | V | G | D | I | I | K | I | T | I | K | E | A | I | P | R | G | K | V | K | K | G | D | V | L | K | A | V | V | V | R | T | K | K | G | V | R | R | P | D | G | S | V | I |
Query Conservation |   |
|
|   |   |
|   |
|   |
|   |
|
|
|
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   | . | . | . | . |   |
|   |
|
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|   |
|   |
|
|
|
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |
|   |
|
|
|
|
|   |   |   |   | . | . | . |   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|
|   |   |
|
Template Sequence |   |
L | E | K | G | S | L | I | T | C | A | D | N | T | G | A | R | E | L | K | V | I | S | V | H | G | Y | S | G | T | K | N | R | L | P | K | A | G | L | G | D | K | I | T | V | S | V | T | K | G | T | P | E | . |
. |
. |
M | R | R | Q | V | L | E | A | V | V | V | R | Q | R | K | P | I | R | R | P | D | G | T | R | V |
Template Known Secondary structure |   |
 |  | T | T |
|  |  |  |  |
| B | S | S | S |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| T | T |
|
|
|  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |
| T | T | . | . | . | T | T | T |
|  |  |  |  |  |  |  |  |
| S | S |
|  |  |
| T | T | S |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | F | D | G | N | A | C | V | L | L | N | N | N | S | E | Q | P | I | G | T | R | I | F | G | P | V | T | R | E | L | R | S | E | K | F | M | K | I | I | S | L | A | P | E | V | L |
Query Conservation |   |
  |
|   |   |
|
|   |
|
|
|
|   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|   |   |
|
|
|   |
|   |   |   |
|
|   |
|
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |
|
|
|
|   |   |   | . |   |
|
|
|
|
|
|   |
|
|
|   |   |
|
|
|   |
| . |   |   |
|
|   |
|
|
|   |   |
|
|
Template Sequence |   |
K | F | E | D | N | A | A | V | I | V | D | E | N | E | . |
D | P | R | G | T | E | L | K | G | P | I | A | R | E | V | A | Q | R | . |
F | G | S | V | A | S | A | A | T | M | I | V |
Template Known Secondary structure |   |
|
| S | S |
|  |  |  |  |  |
| T | T | S | . |
| B | S | S | S |
| B |
| S |
| B |
|  |  |  |  |  |  | . | S |  |  |  |  | T | T |
| S |
| B |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
. | . | . | . | . | . | . | . | . | 130 | . | . |
  |