Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADY3
Confidence13.49%DateWed Jan 25 15:20:29 GMT 2012
Rank16Aligned Residues84
% Identity23%Templated1gd7a_
SCOP infoOB-fold Nucleic acid-binding proteins Myf domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10........ .20.........30 .........40.........50.........60.......
Predicted Secondary structure 








.




.............




















Query SS confidence 
















.











. . . . . . . . . . . . .




































Query Sequence  IQEQTMLNVADNSGARR. VMCIKVLGGSHR. . . . . . . . . . . . . RYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKK
Query Conservation 

  
 
 
 





 .
 

 
      .............  
 


 
 



      




 
 








Alig confidence 
















.











.............




















...












Template Conservation 





     

 


 
 
  

 
      

 
         
 
  
    


  
 
...

 





    
Template Sequence  LRVGRVLRAEPHEKARKPSYKLWVDLGPLGVKQSSAQITELYRPEDLVGRLVVCAVNLGAKRVA. . . GFLSEVLVLGVPD
Template Known Secondary structure 
TT
SS


GGG


TTT

TT

SS

T...T
S

Template Predicted Secondary structure 






















...





Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70..... ....80........
 
   68.70.........80.........90.........100
Predicted Secondary structure 



















Query SS confidence 
































Query Sequence  GVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIF
Query Conservation     
 

  
 
  

 



     





 
Alig confidence  ............




















Template Conservation  ............      

 
      
  
 
Template Sequence  . . . . . . . . . . . . EAGRVVLLAPDREVPLGGKVF
Template Known Secondary structure  ............TTS



SS


TT
B

Template Predicted Secondary structure  ............















Template SS confidence 
































   8990.........100.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions