Job Description P0ADY3 Confidence 100.00% Date Wed Jan 25 15:20:29 GMT 2012 Rank 6 Aligned Residues 116 % Identity 38% Template c2zkrk_ PDB info PDB header:ribosomal protein/rna Chain: K: PDB Molecule:rna expansion segment es19; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		I	Q	E	Q	T	M	L	N	V	A	D	N	S	G	A	R	R	V	M	C	I	K	V	L	G	G	S	H	R	.	.	.	.	R	Y	A	G	V	G	D	I	I	K	I	T	I	K	E	A	I	P	R	G	K	V	K	K	G	D	V	L	K	A	V	V	V	R	T	K	K	G	V	R	R	P	D	G	S	V	I
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.																				.	.	.
Template Conservation																																																						.	.	.
Template Sequence		L	P	V	G	A	V	I	N	C	A	D	N	T	G	A	K	N	L	Y	I	I	S	V	K	G	I	K	G	R	L	N	R	L	P	A	A	G	V	G	D	M	V	M	A	T	V	K	K	G	K	P	E	.	.	.	L	R	K	K	V	H	P	A	V	V	I	R	Q	R	K	S	Y	R	R	K	D	G	V	F	L
Template Known Secondary structure				T	T							B	S	S	S										T	T					T	T							T	T												T	T	.	.	.	T	T	T											S	S					T	T	S
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	D	G	N	A	C	V	L	L	N	N	N	S	E	Q	P	I	G	T	R	I	F	G	P	V	T	R	E	L	R	S	E	K	F	M	K	I	I	S	L	A	P	E	V
Query Conservation
Alig confidence																.																	.
Template Conservation																.																	.
Template Sequence		Y	F	E	D	N	A	G	V	I	V	N	N	K	G	.	E	M	K	G	S	A	I	T	G	P	V	A	K	E	C	A	.	D	L	W	P	R	I	A	S	N	A	G	S	I
Template Known Secondary structure				S	S						B		T	T	S	.		B	S	S	S		B		S								.								T	T		S
Template Predicted Secondary structure																.																	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions