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Job DescriptionP76049
Confidence99.92%DateThu Jan 5 12:17:51 GMT 2012
Rank84Aligned Residues277
% Identity13%Templatec3qitB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:polyketide synthase; PDBTitle: thioesterase domain from curacin biosynthetic pathway
Resolution1.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEP
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Template Sequence  MEEKFLEF. . . . . GGNQICLCSWGSPEH. . . . . . PVVLCIHGILEQGLAWQEV. ALPLAAQGYRVVAPDLFGHGRSSHLE
Template Known Secondary structure 
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TTS......


TT

GGGG.TT


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Query Sequence  RQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDR. RIKAIGTVSAVNIGSIFRNGWENNVKSI
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Template Sequence  MVTSYSSLTFLAQIDRV. . . . . IQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTT
Template Known Secondary structure  SGGG
S.....S
SS
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GGGS








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   6970.........80..... ....90.........100.........110.........120.........130.........140...
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  DALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEV
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Template Sequence  CLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTILGLNNLPGGRSQYLEMLK
Template Known Secondary structure  T






BSSSTTS
TTT
S
GGG




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TT
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   144.....150.........160.........170.........180.........190.........200.........210.........220...
 
   240.........250.........260.........270.........280.........290.....
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Query Sequence  YLTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAI
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Template Sequence  SIQVPTTLVYGDSSKLNRPEDLQQQKMTMTQAKRVFLSG. GHNLHIDAAAALASLI
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   226...230.........240.........250.........260.... .....270.........280
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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