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Job DescriptionP76049
Confidence99.92%DateThu Jan 5 12:17:51 GMT 2012
Rank78Aligned Residues280
% Identity15%Templatec3kdaB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:cftr inhibitory factor (cif); PDBTitle: crystal structure of the cftr inhibitory factor cif with the h269a2 mutation
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  KVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPRQLE
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Template Sequence  ESAYREVDG. . VKLHYVKG. . . . . . . . GQGPLVMLVHGFGQTWYEWHQL. MPELA. KRFTVIAPDLPGLGQSEPPKTGYS
Template Known Secondary structure  TT..........
SS

TT

GGGGTT.T.TTS

TTSTT



SS
SS
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   35....40... ......50. ........60.........70... ..... .80.........90.........100..
 
   85....90.........100.........110.........120.........130.. .......140.........150.........160
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Query Sequence  NPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRR. . . . IKAIGTVSAVNIGSIFRNGWENNVKSID
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Template Sequence  GEQVAVYLHKLARQFSPDRPFD. . . . . . LVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVW
Template Known Secondary structure  SSSS
......TTTTGGGSS

SSGGGGGS
STT
SST
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   103......110.........120.... .....130.........140.........150.........160.........170......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  ALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVY
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Template Sequence  HFSFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTR
Template Known Secondary structure 
STTTT
T
SSGGGS
TSTTTS
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   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   241........250.........260.........270.........280.........290.........300.....
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Query Sequence  LTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFEET
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Template Sequence  LQMPTMTLAGGGAGGMGTFQLEQMKAYAEDVEGHVLPGCGHWLPEECAAPMNRLV. . . IDFLSRG
Template Known Secondary structure  B
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STT

TTTTBSSTT

S
S...TTS
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   257..260.........270.........280.........290.........300.........310. .......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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