Job Description P76049 Confidence 99.94% Date Thu Jan 5 12:17:51 GMT 2012 Rank 41 Aligned Residues 243 % Identity 15% Template c3fnbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:acylaminoacyl peptidase smu_737; PDBTitle: crystal structure of acylaminoacyl peptidase smu_737 from2 streptococcus mutans ua159 Resolution 2.12 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	V	S	F	T	N	S	N	N	P	T	I	S	L	S	A	V	I	Y	F	P	P	K	F	D	E	T	R	Q	Y	Q	A	I	V	L	S	H	P	G	G	G	V	K	E	Q	T	A	G	T	Y	A	K	K	L	A	E	K	G	F	V	T	I	A	Y	D	A	S	Y	Q	G	E	S	G	G	E	P	R	Q	L
Query Conservation
Alig confidence									.	.	.														.	.	.	.
Template Conservation									.	.	.														.	.	.	.
Template Sequence		K	S	I	E	V	P	F	.	.	.	E	G	E	L	L	P	G	Y	A	I	I	S	E	.	.	.	.	D	K	A	Q	D	T	L	I	V	V	G	G	G	D	T	S	R	E	D	L	F	Y	X	L	G	Y	S	G	W	E	H	D	Y	N	V	L	X	V	D	L	P	G	Q	G	K	N	P	N	Q	G	L	H	F
Template Known Secondary structure									.	.	.	T	T											S	.	.	.	.	S												S	S										T							T	T									T	T	S	T	T	G	G	G	G	T
Template Predicted Secondary structure									.	.	.														.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.					.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	P	Y	I	R	T	E	D	I	S	A	V	I	D	Y	L	T	T	L	S	Y	V	D	N	T	R	I	G	A	M	G	I	C	A	G	A	G	Y	T	A	N	A	A	I	Q	D	R	R	I	K	A	I	G	T	V	S	A	V	N	I	G	S	I	F	R	N	G	W	E	N	N	V	K	S	I	D	A	L	P
Query Conservation
Alig confidence				.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	.	.	.	.	.	.	D	A	R	A	A	I	S	A	I	L	D	W	Y	Q	A	P	T	E	K	I	A	I	A	G	F	S	G	G	G	Y	F	T	A	Q	A	V	E	K	D	K	R	I	K	A	W	I	A	S	T	P	I	Y	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	.	.	.	.	.	.		S														S	S	S								T	T													T	T								S			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		206	.							.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	V	E	A	G	S	N	A	R	T	S	D	I	S	S	G	E	Y	A	I	M	P	L	A	P	M	K	E	S	D	A	P	N	E	E	L	R	Q	A	W	E	Y	Y	H	T	P	R	A	Q	Y	P	T	A	P	G	Y	A	T	L	R	S	L	N	Q	I	I	T	Y	D	A	Y	H	M	A	E	V	Y	L	T	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	F	R	I	S	F	S	V	N	K	V	A	E	V	N	L	N	K	Y	A	W	Q	F	G	Q	V	D	F	I	T	S	V	N	E	V	L	E	Q	A	Q	I	V	D	Y	N	K	I	D	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T																		T	S	S																		G	G	G			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		P	T	Q	I	V	A	G	S	Q	A	G	S	K	W	M	S	D	D	L	Y	D	R	A	S	S	.	.	.	.	Q	D	K	R	Y	H	I	V	E	G	A	N	H	M	D	L	Y	D	G	K	A	Y	V	A	E	A	I	S	V	L	A	P	F	F	E	E	T	L
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.
Template Conservation
Template Sequence		P	S	L	F	L	V	G	A	G	E	D	S	E	L	X	R	Q	S	Q	V	L	Y	D	N	F	K	Q	R	G	I	D	V	T	L	R	K	F	S	S	E	S	G	A	D	A	H	C	Q	V	N	N	F	R	L	X	H	Y	Q	V	F	E	W	L	N	H	I	F
Template Known Secondary structure									S	S	S																		T	T										T	T	T	T			S	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions