Job Description P76049 Confidence 99.81% Date Thu Jan 5 12:17:51 GMT 2012 Rank 165 Aligned Residues 212 % Identity 17% Template c3fleB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:se_1780 protein; PDBTitle: se_1780 protein of unknown function from staphylococcus epidermidis. Resolution 2.01 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.																80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	Y	Q	A	I	V	L	S	H	P	G	G	G	V	K	E	Q	T	A	G	T	Y	A	K	K	L	A	E	K	G	F	.	.	V	T	I	A	Y	D	A	S	Y	Q	G	E	S	G	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	Q	L	E	N	P	Y	I	R	T	E	D	I	S
Query Conservation																																		.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																		.										.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																		.
Template Sequence		K	T	T	A	.	T	L	F	L	H	G	Y	G	G	S	E	R	S	E	T	F	X	.	V	K	Q	A	L	N	K	N	V	T	N	E	V	I	T	A	R	V	S	S	E	G	K	V	Y	F	D	K	K	L	S	A	A	N	P	I	V	K	V	E	F	K	D	N	K	N	G	N	F	K	E	N	A	Y	W	I	K
Template Known Secondary structure						.							T	T			G	G	G	G				.							T	T			S									T	T	S					S	S						S								S	S
Template Predicted Secondary structure						.																		.
Template SS confidence
		44	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	D	Y	L	T	T	L	S	Y	V	D	N	T	R	I	G	A	M	G	I	C	A	G	A	G	Y	T	A	N	A	A	I	Q	D	R	R	I	K	A	I	G	T	V	S	A	V	N	I	G	S	I	F	R	N	G	W	E	N	N	V	K	S	I	D	A	L	P	Y	V	E	A	G	S	N	A	R	T	S
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		E	V	L	S	Q	L	K	S	Q	F	G	I	.	.	Q	Q	F	N	F	V	G	H	S	X	G	N	X	S	F	A	F	Y	X	K	N	Y	G	D	D	R	H	L	P	Q	L	K	K	E	V	N	I	A	G	V	Y	N	G	I	L	N	X	N	E	N	V	N	E	I	I	V	D	K	Q	G	K	P	S	R	X	N
Template Known Secondary structure														.	.									T														T	T		T	T	S										S			T	T			B	T	T	T	B		T	T				B		S	S			B	S	S
Template Predicted Secondary structure														.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		D	I	S	S	G	E	Y	A	I	M	P	L	A	P	M	K	E	S	D	A	P	N	E	E	L	R	Q	A	W	E	Y	Y	H	T	P	R	A	Q	Y	P	T	A	P	G	Y	A	T	L	R	S	L	N	Q	I	I	T	Y	D	A	Y	H	M	A	E	V	Y	L	T	Q	P	T	Q	I	V	A	G	S	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	Y	R	Q	L	L	S	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	Y	C	G	K	E	I	E	V	L	N	I	Y	G	D	L	E	D
Template Known Secondary structure						T	T	T	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S	T	T	S													S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.																																																				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
					252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.							.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure		.	.	.																						.	.	.	.	.	.
Query SS confidence		.	.	.																						.	.	.	.	.	.
Query Sequence		.	.	.	Q	A	G	S	K	W	M	S	D	D	L	Y	D	R	A	S	S	Q	D	K	R	.	.	.	.	.	.	Y	H	I	V	E	G	A	N	H	M	D	L	Y	D	G	K	A	Y	V	A	E	A	I	S	V	L	A	P	F	F
Query Conservation		.	.	.																						.	.	.	.	.	.
Alig confidence		.	.	.																						.	.	.	.	.	.																	.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		G	S	H	S	D	G	R	V	S	N	S	S	S	Q	S	L	Q	Y	L	L	R	G	S	T	K	S	Y	Q	E	X	K	F	K	G	A	K	A	Q	H	S	Q	L	H	E	N	K	.	.	.	.	D	V	A	N	E	I	I	Q	F	L
Template Known Secondary structure		S	S	S	B	S	S	S	S	B						T							S			S									S	G	G	G	S	T	T	G	G	G	S			.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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