Phyre 2 alignment of P76049 with c3f67A

Job Description P76049
Confidence 99.91% Date Thu Jan 5 12:17:51 GMT 2012

Rank 93 Aligned Residues 220

% Identity 17% Template c3f67A_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative dienelactone hydrolase; PDBTitle: crystal structure of putative dienelactone hydrolase from klebsiella2 pneumoniae subsp. pneumoniae mgh 78578

Resolution 1.74 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence	M	M	N	N	K	V	S	F	T	N	S	N	N	P	T	I	S	L	S	A	V	I	Y	F	P	P	K	F	D	E	T	R	Q	Y	Q	A	I	V	L	S	H	P	G	G	G	V	K	E	Q	T	A	G	T	Y	A	K	K	L	A	E	K	G	F	V	T	I	A	Y	D	A	S	Y	Q	G	E	S	G	G	E	P
Query Conservation
Alig confidence											.	.	.															.	.																									.
Template Conservation											.	.	.															.	.																									.
Template Sequence	I	I	A	G	E	T	S	I	P	S	.	.	.	Q	G	E	N	X	P	A	Y	H	A	R	P	K	N	.	.	A	D	G	P	L	P	I	V	I	V	V	Q	E	I	F	G	V	H	E	H	I	R	D	L	.	C	R	R	L	A	Q	E	G	Y	L	A	I	A	P	E	L	Y	F	R	Q	G	D	P	N	E	Y
Template Known Secondary structure											.	.	.	T	T											T	T	.	.			S											T	T		S								.							T	T								T	T	T	T	T			G	G	G
Template Predicted Secondary structure											.	.	.															.	.																									.
Template SS confidence
	1	.	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

	81	.	.	.	.	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.
Query Sequence	R	Q	L	E	N	P	Y	I	R	T	.	.	.	.	.	.	.	.	.	E	D	I	S	A	V	I	D	Y	L	T	T	L	S	Y	V	D	N	T	R	I	G	A	M	G	I	C	A	G	A	G	Y	T	A	N	A	A	I	Q	D	R	R	I	K	A	I	G	T	V	S	A	V	N	I	G	S	I	F	R	N	G
Query Conservation											.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.
Template Sequence	H	D	I	P	T	L	F	K	E	L	V	S	K	V	P	D	A	Q	V	L	A	D	L	D	H	V	A	S	W	A	A	R	H	G	G	D	A	H	R	L	L	I	T	G	F	C	W	G	G	R	I	T	W	L	Y	A	A	H	N	P	Q	L	K	A	A	V	A	W	Y	G	K	L	.	.	.	.	.	.	.	.
Template Known Secondary structure		S								T	G	G	G	S																		T	T	T												T											T	T		T	T								S				.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Template SS confidence
	75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

	152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence	W	E	N	N	V	K	S	I	D	A	L	P	Y	V	E	A	G	S	N	A	R	T	S	D	I	S	S	G	E	Y	A	I	M	P	L	A	P	M	K	E	S	D	A	P	N	E	E	L	R	Q	A	W	E	Y	Y	H	T	P	R	A	Q	Y	P	T	A	P	G	Y	A	T	L	R	S	L	N	Q	I	I	T	Y
Query Conservation
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	E	K	S	L	N	S	P
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					S	S	S
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																								147	.	.	150	.	.	.	.	.

	232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.						.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																															.	.	.	.																										.	.	.	.	.
Query SS confidence																															.	.	.	.																										.	.	.	.	.
Query Sequence	D	A	Y	H	M	A	E	V	Y	L	T	Q	P	T	Q	I	V	A	G	S	Q	A	G	S	K	W	M	S	D	D	.	.	.	.	L	Y	D	R	A	S	S	Q	D	K	R	Y	H	I	V	E	G	A	N	H	M	D	L	Y	D	.	.	.	.	.	G	K	A	Y	V	A	E	A	I	S	V	L	A	P	F	F
Query Conservation																															.	.	.	.																										.	.	.	.	.
Alig confidence																															.	.	.	.																										.	.	.	.	.
Template Conservation
Template Sequence	K	H	P	V	D	I	A	V	D	L	N	A	P	V	L	G	L	Y	G	A	K	D	A	S	I	P	Q	D	T	V	E	T	X	R	Q	A	L	R	A	A	N	A	T	A	E	I	V	V	Y	P	E	A	D	H	A	F	N	A	D	Y	R	A	S	Y	H	E	E	S	A	K	D	G	W	Q	R	X	L	A	W	F
Template Known Secondary structure							G	G	G			S								T	T		T	T	S															T	T		S							T	T			T	T	T	T		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
	156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

	303	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence	A	Q	Y
Template Known Secondary structure	T	T
Template Predicted Secondary structure
Template SS confidence
	236	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions