Job Description P76049 Confidence 99.93% Date Thu Jan 5 12:17:51 GMT 2012 Rank 67 Aligned Residues 277 % Identity 13% Template c2yysA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:proline iminopeptidase-related protein; PDBTitle: crystal structure of the proline iminopeptidase-related protein2 ttha1809 from thermus thermophilus hb8 Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	N	K	V	S	F	T	N	S	N	N	P	T	I	S	L	S	A	V	I	Y	F	P	P	K	F	D	E	T	R	Q	Y	Q	A	I	V	L	S	H	P	G	G	G	V	K	E	Q	T	A	G	T	Y	A	K	K	L	A	E	K	G	F	V	T	I	A	Y	D	A	S	Y	Q	G	E	S	G	G	E	P	R
Query Conservation
Alig confidence														.	.														.	.	.	.	.	.																									.
Template Conservation														.	.														.	.	.	.	.	.																									.
Template Sequence		M	R	E	E	I	G	Y	V	P	V	G	E	.	.	A	E	L	Y	V	E	D	V	G	P	V	E	G	.	.	.	.	.	.	P	A	L	F	V	L	H	G	G	P	G	G	N	A	Y	V	L	R	E	G	L	Q	D	Y	.	L	E	G	F	R	V	V	Y	F	D	Q	R	G	S	G	R	S	L	E	L	P	Q
Template Known Secondary structure												S	S	.	.									S		T	T	S	.	.	.	.	.	.									T	T	T			S								G	G	G	.		T	T	S								T	T	S	T	T	S					S
Template Predicted Secondary structure														.	.														.	.	.	.	.	.																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	E	N	P	Y	I	R	T	E	D	I	S	A	V	I	D	Y	L	T	T	L	S	Y	V	D	N	T	R	I	G	A	M	G	I	C	A	G	A	G	Y	T	A	N	A	A	I	Q	D	R	R	I	K	A	I	G	T	V	S	A	V	N	I	G	S	I	F	R	N	G	W	E	N	N	V	K	S	I	D	A
Query Conservation
Alig confidence												.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		D	P	R	L	F	T	V	D	A	L	.	.	.	.	V	E	D	T	L	L	L	A	E	A	L	G	V	E	R	F	G	L	L	A	H	G	F	G	A	V	V	A	L	E	V	L	R	R	F	P	Q	A	E	G	A	I	L	L	A	P	W	V	N	F	P	W	L	A	A	.	.	.	.	.	.	.	.	.	.	R
Template Known Secondary structure			G	G	G							.	.	.	.											T	T			S							T	T													T	T								S				B							.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.											.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	Y	V	E	A	G	S	N	A	R	T	S	D	I	S	S	G	E	Y	A	I	M	P	L	A	P	M	K	E	S	D	A	P	N	E	E	L	R	Q	A	W	E	Y	Y	H	T	P	R	A	Q	Y	P	T	A	P	G	Y	A	T	L	R	S	L	N	Q	I	I	T	Y	D	A	Y	H	M	A	E	V	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	E	A	A	G	L	A	P	L	P	D	P	E	E	N	L	K	E	A	L	K	R	E	E	P	K	A	L	F	D	R	L	M	F	P	T	P	R	G	R	M	A	Y	E	W	L	A	E	G	A	G	I	L	G	S	D	A	P	G	L	A	F	L	R	N	G	L	W	R	L	D	Y	T	P	Y	L	T	P	E
Template Known Secondary structure						T	T					S													S												S	S														T	T					S									T	T	G	G	G		B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	P	T	Q	I	V	A	G	S	Q	A	G	S	K	W	M	S	D	D	L	Y	D	R	A	S	S	Q	D	K	R	Y	H	I	V	E	G	A	N	H	M	D	L	Y	D	G	K	A	Y	V	A	E	A	I	S	V	L	A	P	F	F	E	E	T	L
Query Conservation
Alig confidence																											.	.																												.	.	.
Template Conservation																											.	.																												.	.	.
Template Sequence		R	R	P	L	Y	V	L	V	G	E	R	D	G	T	S	Y	P	Y	A	E	E	V	A	S	R	.	.	L	R	A	P	I	R	V	L	P	E	A	G	H	Y	L	W	I	D	A	P	E	A	F	E	E	A	F	.	.	.	K	E	A	L	A	A	L	V
Template Known Secondary structure		S	S								T	T		T	T	T	T	T	T								.	.		T							T	T			S	S														.	.	.						T	T
Template Predicted Secondary structure																											.	.																												.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions