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Job DescriptionP76049
Confidence99.88%DateThu Jan 5 12:17:51 GMT 2012
Rank119Aligned Residues282
% Identity12%Templatec2qvbA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:haloalkane dehalogenase 3; PDBTitle: crystal structure of haloalkane dehalogenase rv2579 from mycobacterium2 tuberculosis
Resolution1.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  SFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEPRQLENP
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Template Sequence  KYLEIAG. . KRMAYIDE. . . . . . . . GKGDAIVFQHGNPTSSYLWRNI. MPHLE. GLGRLVACDLIGMGASDKLSPSGPDR
Template Known Secondary structure  TT..........SSSS

TT

GGGGTTT.GGGGT.TSS

TTSTTS


SS
STTS
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   13...... 20....... ..30.........40......... 50.... .....60.........70.........80
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  YIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSIDALPYVE
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Template Sequence  YSYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQG
Template Known Secondary structure  S
TT

S
SGGG

S
B
GGGS
GGGTSTT
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  AGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVYLTQPTQ
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Template Sequence  EPMALEHNIFVERVLPGAILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDMPKL
Template Known Secondary structure  TT
TT
SS


GGG
SSSGGGS
BTTBS

S
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   247..250.........260.........270.........280.........290.........300.....
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Query Sequence  IVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFEET
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Template Sequence  FINAEPGAIITGRIRDYVR. SWPNQTEITVPG. VHFVQEDSPEEIGAAI. . . AQFVRRL
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SSS
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GGGT
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   241........250......... 260.........270. ........280....... ..290....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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