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Job DescriptionP76049
Confidence99.88%DateThu Jan 5 12:17:51 GMT 2012
Rank121Aligned Residues253
% Identity15%Templatec2ockA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:valacyclovir hydrolase; PDBTitle: crystal structure of valacyclovir hydrolase d123n mutant
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MMNNKVSFTNSNNPTISLSAVIYFPPKFDETRQYQAIVLSHPGGGVKEQTAGTYAKKLAEKGFVTIAYDASYQGESGGEP
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Template Sequence  VTSAKVAV. . . . . NGVQLHYQQTGEGD. . . . . . . HAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPD
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   22....... 30.........40... ......50.........60.........70.........80.........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  RQLENPYIRTEDISAVIDYLTTLSYVDNTRIGAMGICAGAGYTANAAIQDRRIKAIGTVSAVNIGSIFRNGWENNVKSID
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Template Sequence  RDFPADFFERD. . . . AKDAVDLMKALKFKKVSLLGWSNGGITALIAAAKYPSYIHKMVIWGANAYVTDED. . . . . . . . . .
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   90.........100 .........110.........120.........130.........140.........150.....
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  ALPYVEAGSNARTSDISSGEYAIMPLAPMKESDAPNEELRQAWEYYHTPRAQYPTAPGYATLRSLNQIITYDAYHMAEVY
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . SMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPR
Template Known Secondary structure  .....................S
GGGS

GGGGSGGGBSSTTTGGG
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   156...160.........170.........180.........190.........200.........210....
 
   241........250.........260.........270.........280.........290.........300...
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Query Sequence  LTQPTQIVAGSQAGSKWMSDDLYDRASSQDKRYHIVEGANHMDLYDGKAYVAEAISVLAPFFE
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Template Sequence  VQCPALIVHGEKDPLVPRFHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLA. . . EDFLQ
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   215....220.........230.........240.........250.........260......... 270....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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