Phyre 2 alignment of P76049 with c2b9vB

Job Description P76049
Confidence 99.94% Date Thu Jan 5 12:17:51 GMT 2012

Rank 39 Aligned Residues 295

% Identity 16% Template c2b9vB_

PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-amino acid ester hydrolase; PDBTitle: acetobacter turbidans alpha-amino acid ester hydrolase

Resolution 2.00 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.												.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence	M	N	N	K	V	S	F	T	N	S	N	N	P	T	I	S	L	S	A	V	I	Y	F	P	P	K	F	D	E	T	R	Q	Y	Q	A	I	V	L	S	H	P	G	G	.	.	.	.	.	.	.	.	.	.	.	G	V	K	E	Q	T	A	G	T	Y	A	K	K	L	A	E	K	G	F	V	T	I	A	Y	D	A
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.													.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.													.	.	.
Template Sequence	I	K	R	E	V	M	V	P	M	R	D	G	.	.	V	K	L	Y	T	V	I	V	I	P	K	N	.	.	.	A	R	N	A	P	I	L	L	T	R	T	P	Y	N	A	K	G	R	A	N	R	V	P	N	A	L	T	M	R	E	V	L	P	Q	G	D	D	V	F	V	E	G	G	Y	I	R	V	F	Q	D	I
Template Known Secondary structure										T	T	S	.	.											T	T	.	.	.			S									S	S						T		S	S	T	T		S	S					S		G	G	G						T	T
Template Predicted Secondary structure													.	.													.	.	.
Template SS confidence
	76	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

	71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																																									.
Query SS confidence																			.	.	.	.	.	.	.	.																																									.
Query Sequence	S	Y	Q	G	E	S	G	G	E	P	R	Q	L	E	N	P	Y	I	.	.	.	.	.	.	.	.	R	T	E	D	I	S	A	V	I	D	Y	L	T	T	L	S	Y	V	D	N	T	R	I	G	A	M	G	I	C	A	G	A	G	Y	T	A	N	A	A	I	.	Q	D	R	R	I	K	A	I	G	T	V	S	A
Query Conservation																			.	.	.	.	.	.	.	.																																									.
Alig confidence																			.	.	.	.	.	.	.	.																																									.
Template Conservation
Template Sequence	R	G	K	Y	G	S	Q	G	D	Y	V	M	T	R	P	P	H	G	P	L	N	P	T	K	T	D	E	T	T	D	A	W	D	T	V	D	W	L	V	H	N	V	P	E	S	N	G	R	V	G	M	T	G	S	S	Y	E	G	F	T	V	V	M	A	L	L	D	P	H	P	A	L	K	V	A	A	P	E	S	P
Template Known Secondary structure	T	T	S	T	T			S				T	T				S	B	T	T	B		S	S																			T	T																						T	S			T	T
Template Predicted Secondary structure
Template SS confidence
	151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

	142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	N	I	G	S	I	F	R	N	G	W	E	N	N	V	K	S	I	D	A	L	P	Y	V	E	A	G	S	N	A	R	T	S	D	I	S	S	G	E	Y	A	I	M	P	L	A	P	M	K	E	S	D	A	P	N	E	E	L	R	Q	A	W	E	Y	Y	H	T	P	R	A	Q	Y	P	T	A	P	G	Y	A	T
Query Conservation
Alig confidence																																			.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence	M	V	D	G	W	M	G	D	D	W	F	H	Y	G	A	F	R	Q	G	A	F	D	Y	F	V	S	Q	M	T	A	R	G	G	G	.	.	.	.	N	D	I	P	R	R	D	A	D	D	Y	T	N	F	L	K	A	G	S	A	G	S	F	A	T	Q	A	G	L	D	Q	Y	P	F	W	Q	R	M	H	A	H	P
Template Known Secondary structure				T	T	T	T	S	S	S			T	T			B	T	T										S	S	S	S			.	.	.	.						S	S	S											S								T	T	G	G	G									T
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
	231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

	222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.					.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.												.
Predicted Secondary structure																																	.															.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.															.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence	L	R	S	L	N	Q	I	I	T	Y	D	A	Y	H	M	A	E	V	Y	L	T	Q	P	T	Q	I	V	A	G	S	Q	A	.	G	S	K	W	M	S	D	D	L	Y	D	R	A	S	.	.	.	.	S	Q	D	K	R	Y	H	I	V	E	G	A	N	H	M	D	L	.	.	.	.	.	.	.	.	.	.	.	Y
Query Conservation																																	.															.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.															.	.	.	.												.						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.
Template Sequence	A	Y	D	A	F	W	Q	G	Q	A	L	D	K	I	L	A	Q	R	K	P	T	V	P	M	L	W	E	Q	G	L	W	D	Q	E	D	M	W	G	A	I	H	A	W	Q	A	L	K	D	A	D	V	K	A	P	N	T	L	V	M	G	P	W	.	R	H	S	G	V	N	Y	N	G	S	T	L	G	P	L	E	F
Template Known Secondary structure	S	S	S					T	T													S								T	T		S	S		S	S												T	T		S	S								S		.		T	T	G	G	G	S			S			T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
	307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

	286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	D	G	K	A	Y	V	A	E	A	I	S	V	L	A	P	F	F	E	E	T	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	E	G	D	T	A	H	Q	Y	R	R	D	V	F	R	P	F	F	D	E	Y	L
Template Known Secondary structure	S	S										T
Template Predicted Secondary structure
Template SS confidence
	386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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